RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 GRB14Q14449 540 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 PPP1R3AQ16821 1122 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ZNF549Q6P9A3 640 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 TXNDC11Q6PKC3 985 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 IFNL1Q8IU54 200 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 NPWQ8N729 165 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ADCY4Q8NFM4 1077 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 KLHL32Q96NJ5 620 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 APOL4Q9BPW4 351 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 TMEM245Q9H330 911 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 AKTIPQ9H8T0 292 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 POLR3BQ9NW08 1133 aaPredicted RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 QPCTLQ9NXS2 382 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 A0A1W2PRU2 124 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 A6NL46 340 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 FAM220BPB1ANY3 271 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 NDST2P52849 883 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 DEFA1P59665 94 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 DEFA3P59666 94 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 CCDC157Q569K6 752 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 MBLAC2Q68D91 279 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 HMBOX1Q6NT76 420 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 OOSP2Q86WS3 158 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 SAMD14Q8IZD0 417 aaPredicted RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 SLC35B4Q969S0 331 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ITPKCQ96DU7 683 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ARHGAP39Q9C0H5 1083 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 CLK4Q9HAZ1 481 aaKnown RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 RAD18Q9NS91 495 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 TPRKBQ9Y3C4 175 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 ANKRD34BA5PLL1 514 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 ALOX12P18054 663 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 IL12RB1P42701 662 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 CDH15P55291 814 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 GALNT2Q10471 571 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 MOGSQ13724 837 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 E2F2Q14209 437 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 PAFAH1B3Q15102 231 aaKnown RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 DNAJB7Q7Z6W7 309 aaPredicted RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 FAM124AQ86V42 546 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 SLC22A8Q8TCC7 542 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 SLC7A6OSQ96CW6 309 aaPredicted RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 PSKH2Q96QS6 385 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 CGREF1Q99674 301 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 HOPXQ9BPY8 73 aaPredicted RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 HMG20AQ9NP66 347 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 AMBNQ9NP70 447 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 PNPLA3Q9NST1 481 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 FBXO10Q9UK96 956 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 TBC1D30Q9Y2I9 924 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 KLHL20Q9Y2M5 609 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 CA12O43570 354 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 RCVRNP35243 200 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 TRIM32Q13049 653 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 IGSF11Q5DX21 431 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 KCTD13Q8WZ19 329 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 CXCL16Q9H2A7 254 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 SIRPGQ9P1W8 387 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 KIAA1522Q9P206 1035 aaPredicted RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 OGDHLQ9ULD0 1010 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 AOC2O75106 756 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 FGF3P11487 239 aaPredicted RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 MAPK8P45983 427 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 SLC18A1P54219 525 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 CDH4P55283 916 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 BNIP2Q12982 314 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 DGKKQ5KSL6 1271 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 PLEKHM3Q6ZWE6 761 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 LYSMD3Q7Z3D4 306 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 OR10T2Q8NGX3 314 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 PROX1Q92786 737 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 OSBPL2Q9H1P3 480 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 ABCB8Q9NUT2 735 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.07□□□□□ -0.48
BDNF-218ENST00000533246 GTF2A1LQ9UNN4 478 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 TLR6Q9Y2C9 796 aa12.07□□□□□ -0.48
BDNF-218ENST00000533246 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
BDNF-218ENST00000533246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.06□□□□□ -0.48
BDNF-218ENST00000533246 LRRC14BA6NHZ5 514 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 ATF6P18850 670 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 MTHFRP42898 656 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 KIR3DL1P43629 444 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 CHIT1Q13231 466 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 CYP2A13Q16696 494 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 ZNF605Q86T29 641 aa12.06□□□□□ -0.48
BDNF-218ENST00000533246 TXNDC5Q8NBS9 432 aaKnown RBP12.06□□□□□ -0.48
BDNF-218ENST00000533246 KBTBD7Q8WVZ9 684 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms