RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TMEM115Q12893 351 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 OR4D1Q15615 310 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 ARL13AQ5H913 290 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 PTRHD1Q6GMV3 140 aaKnown RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 ADAMTSL4Q6UY14 1074 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 EXT2Q93063 718 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 HIC2Q96JB3 615 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 DRC3Q9H069 523 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 CXorf56Q9H5V9 222 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 POM121BA6NF01 834 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 A8MT66 165 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 LAMTOR5O43504 91 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 PYGLP06737 847 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 ATP1B2P14415 290 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 CHRM3P20309 590 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 RPS3P23396 243 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 TRIM23P36406 574 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 CDK3Q00526 305 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 RCN2Q14257 317 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 C1orf210Q8IVY1 113 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 WDR75Q8IWA0 830 aaKnown RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 PHF21BQ96EK2 531 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 TMEM237Q96Q45 408 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 WDR26Q9H7D7 661 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 PCDHB1Q9Y5F3 818 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 EML5Q05BV3 1969 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 VPS13AQ96RL7 3174 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 H0Y8X5 98 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 ITGB6P18564 788 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 HNRNPA2B1P22626 353 aaKnown RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 CCR5P51681 352 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 VWA5B1Q5TIE3 1220 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 RPS27LQ71UM5 84 aaKnown RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 CLNKQ7Z7G1 428 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 LSMEM2Q8N112 164 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 RASGEF1AQ8N9B8 481 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 CD200R1Q8TD46 325 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 TEX101Q9BY14 249 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 OR2AG1Q9H205 316 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 SARS2Q9NP81 518 aaKnown RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 PRMT8Q9NR22 394 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 GNPTGQ9UJJ9 305 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-208ENST00000533123 TMEM98Q9Y2Y6 226 aa18.18■□□□□ 0.5
SMPD1-208ENST00000533123 OR2AG2A6NM03 316 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 CFAP99D6REC4 459 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 ZNF195O14628 629 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 VPS26AO75436 327 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 FNTBP49356 437 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 PRKAA2P54646 552 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 ADGRG6Q86SQ4 1221 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 LKAAEAR1Q8TD35 194 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 SNX19Q92543 992 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 COX14Q96I36 57 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 SPACA7Q96KW9 195 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 NMUR2Q9GZQ4 415 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 WWP1Q9H0M0 922 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 TRIM39Q9HCM9 518 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 KNL1Q8NG31 2342 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 E5RI56 91 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 IPO13O94829 963 aaKnown RBP18.17■□□□□ 0.5
SMPD1-208ENST00000533123 CDK14O94921 469 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 TRIM16O95361 564 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 NCALDP61601 193 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 RPL6Q02878 288 aaKnown RBP18.17■□□□□ 0.5
SMPD1-208ENST00000533123 DOK6Q6PKX4 331 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 MACC1Q6ZN28 852 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 MAML2Q8IZL2 1156 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-208ENST00000533123 BEND7Q8N7W2 519 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-208ENST00000533123 KCNJ9Q92806 393 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 EPHX3Q9H6B9 360 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 SYTL2Q9HCH5 934 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 ATXN10Q9UBB4 475 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 TRMT6Q9UJA5 497 aaKnown RBP18.17■□□□□ 0.5
SMPD1-208ENST00000533123 TRIM33Q9UPN9 1127 aa18.17■□□□□ 0.5
SMPD1-208ENST00000533123 FPGTO14772 594 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 SGTAO43765 313 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 CBX6O95503 412 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 BCKDHBP21953 392 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 HOXA6P31267 233 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 CTSCP53634 463 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 DNAJB13P59910 316 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 CSTF1Q05048 431 aaKnown RBP18.16■□□□□ 0.5
SMPD1-208ENST00000533123 CPNE9Q8IYJ1 553 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 DENND6BQ8NEG7 585 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 BMFQ96LC9 184 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 NCKIPSDQ9NZQ3 722 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 ARMCX1Q9P291 453 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 COMMD10Q9Y6G5 202 aa18.16■□□□□ 0.5
SMPD1-208ENST00000533123 UBXN8O00124 270 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 FCHO1O14526 889 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 MAP3K13O43283 966 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 TSPAN12O95859 305 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 TDGF1P13385 188 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 TEAD1P28347 426 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 CLCN7P51798 805 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 CYB5D1Q6P9G0 228 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 RILPQ96NA2 401 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 APOOQ9BUR5 198 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms