RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DNAH14Q0VDD8 3507 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 A0A087WUV0 522 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC5A10A0PJK1 596 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 A6NCN8 305 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 CXorf49A8MYA2 514 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 IFRD1O00458 451 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 NOBOXO60393 691 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 NIPSNAP2O75323 286 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 VPS26AO75436 327 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 PIAS1O75925 651 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 EML2O95834 649 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 F7P08709 466 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC35G4P0C7Q5 338 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 CKMT1AP12532 417 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 MYF5P13349 255 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 CEACAM1P13688 526 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 CKMT2P17540 419 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 XRCC1P18887 633 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 AOAHP28039 575 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 GP5P40197 560 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SKIV2L2P42285 1042 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 HSPA14Q0VDF9 509 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 BOP1Q14137 746 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 CLCA4Q14CN2 919 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 TMED2Q15363 201 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SYTL3Q4VX76 610 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 GRTP1Q5TC63 336 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 UGT3A1Q6NUS8 523 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZNF549Q6P9A3 640 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC9B2Q86UD5 537 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC35F3Q8IY50 421 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 SFRP1Q8N474 314 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 GPATCH11Q8N954 259 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 AVL9Q8NBF6 648 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 BAHD1Q8TBE0 780 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 KCNJ9Q92806 393 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 NDNQ99608 321 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 AARSD1Q9BTE6 412 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 FUT8Q9BYC5 575 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 TXLNGYQ9BZA5 131 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 WWP1Q9H0M0 922 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 STN1Q9H668 368 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 LATS2Q9NRM7 1088 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 TAS2R13Q9NYV9 303 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 KLHL42Q9P2K6 505 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 PSMD13Q9UNM6 376 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 WDR37Q9Y2I8 494 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 PSAT1Q9Y617 370 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZNF106Q9H2Y7 1883 aaKnown RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZNF292O60281 2723 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 CPED1A4D0V7 1026 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 EME2A4GXA9 379 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 RHPN2P1A8MT19 583 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZW10O43264 779 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 RIPK2O43353 540 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 GPC4O75487 556 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLCO2B1O94956 709 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 VIPP01282 170 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 C1QAP02745 245 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 BRAFP15056 766 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 GLB1P16278 677 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 PDHA2P29803 388 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 SPRP35270 261 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 CSE1LP55060 971 aaKnown RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 KRT33BQ14525 404 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 RPE65Q16518 533 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 KLHL38Q2WGJ6 581 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 TTLL9Q3SXZ7 439 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 GLIPR1L2Q4G1C9 344 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZNF658BQ4V348 819 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 PLEKHS1Q5SXH7 462 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 HECTD2Q5U5R9 776 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 CAPRIN2Q6IMN6 1127 aaKnown RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM45BPQ6NSW5 357 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 NAPRTQ6XQN6 538 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 GLRX5Q86SX6 157 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZC3HC1Q86WB0 502 aaKnown RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 C17orf82Q86X59 251 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 SFTPA2Q8IWL1 248 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 TRIM48Q8IWZ4 208 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZBTB2Q8N680 514 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 LILRA3Q8N6C8 439 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 KYQ8NBH2 561 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM45AQ8TCE6 357 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 LKAAEAR1Q8TD35 194 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC37A2Q8TED4 501 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 HNRNPLLQ8WVV9 542 aaKnown RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 PATE1Q8WXA2 126 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 INPP5DQ92835 1189 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 NAT6Q93015 286 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 SH3KBP1Q96B97 665 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM136AQ96C01 138 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 CXorf40BQ96DE9 158 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ATXN7L3BQ96GX2 97 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-211ENST00000533012 CCDC77Q9BR77 488 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 OR52A5Q9H2C5 316 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 RHOJQ9H4E5 214 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 ACSS3Q9H6R3 686 aa11□□□□□ -0.65
TRAPPC4-211ENST00000533012 OGFRQ9NZT2 677 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms