RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 IRAK3Q9Y616 596 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 SIN3BO75182 1162 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 SAGP10523 405 aaPredicted RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 PRPS2P11908 318 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF37AP17032 561 aaPredicted RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 IL1R2P27930 398 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF730Q6ZMV8 503 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 HEATR4Q86WZ0 1026 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 LRRC57Q8N9N7 239 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 EXOSC8Q96B26 276 aaKnown RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 CHRNGP07510 517 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ACVRL1P37023 503 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 CDK9P50750 372 aaKnown RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 VWA5B1Q5TIE3 1220 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 PTCHD4Q6ZW05 846 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 AMZ2Q86W34 360 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 PRSS58Q8IYP2 241 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 RTKNQ9BST9 563 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 GNAZP19086 355 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 POLR2JP52435 117 aaKnown RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 FOXM1Q08050 763 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 CCNIQ14094 377 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 AMZ1Q400G9 498 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 GPR33Q49SQ1 333 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 INTS10Q9NVR2 710 aaKnown RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF180Q9UJW8 692 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 CDC14AQ9UNH5 594 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 C15orf41Q9Y2V0 281 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 SCN11AQ9UI33 1791 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 ADAMTSL3P82987 1691 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 J3KR12 359 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 EDF1O60869 148 aaKnown RBP14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 ECT2LQ008S8 904 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 FAM91A1Q658Y4 838 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 TMEM130Q8N3G9 435 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 OR13C4Q8NGS5 318 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 POF1BQ8WVV4 589 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 TTYH3Q9C0H2 523 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 COMMD9Q9P000 198 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 FBXW2Q9UKT8 454 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 BTBD3Q9Y2F9 522 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 MAP2K7O14733 419 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 UGT1A9O60656 530 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 MTX2O75431 263 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 UROSP10746 265 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 GTF2H2Q13888 395 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 ADGRF1Q5T601 910 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 GTF2H2CQ6P1K8 395 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 PCYT2Q99447 389 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 UGT1A7Q9HAW7 530 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 UGT1A10Q9HAW8 530 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 UGT1A8Q9HAW9 530 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 EIF2B3Q9NR50 452 aaKnown RBP14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 CKLFQ9UBR5 152 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 ADGRE2Q9UHX3 823 aa14.58□□□□□ -0.07
PCDHA9-202ENST00000532602 C4BP0C0L5 1744 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 HLA-DQB2P05538 268 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 CAPGP40121 348 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 IL12RB1P42701 662 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 CLCQ05315 142 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 MAPK11Q15759 364 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TXNRD3NBQ6F5E7 133 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 ZNF280BQ86YH2 543 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 CPNE9Q8IYJ1 553 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 CELF5Q8N6W0 485 aaKnown RBP14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 C11orf65Q8NCR3 313 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TWIST2Q8WVJ9 160 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 NTAN1Q96AB6 310 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 ZHX1-C8orf76Q96EF9 292 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 FAM192AQ9GZU8 254 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 WDR26Q9H7D7 661 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SSR3Q9UNL2 185 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 F2P00734 622 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 EFNA1P20827 205 aaPredicted RBP14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SCNN1AP37088 669 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 GHRHRQ02643 423 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 DDI2Q5TDH0 399 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 METTL21CQ5VZV1 264 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 AAGABQ6PD74 315 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 YTHDF3Q7Z739 585 aaKnown RBP14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 ZNF598Q86UK7 904 aaKnown RBP14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TRPV3Q8NET8 790 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TTLQ8NG68 377 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 C12orf66Q96MD2 445 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 OSBPL11Q9BXB4 747 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TBC1D10AQ9BXI6 508 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TMEM150CB9EJG8 249 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 WNT9AO14904 365 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 TLX3O43711 291 aaPredicted RBP14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 B3GALT2O43825 422 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 DNAJA2O60884 412 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SLC1A5Q15758 541 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SAPCD2Q86UD0 394 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 PIH1D2Q8WWB5 315 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SLC38A4Q969I6 547 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SIPA1Q96FS4 1042 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 NR2E1Q9Y466 385 aa14.58□□□□□ -0.08
PCDHA9-202ENST00000532602 SAP18O00422 153 aaKnown RBP14.57□□□□□ -0.08
PCDHA9-202ENST00000532602 CFIP05156 583 aa14.57□□□□□ -0.08
PCDHA9-202ENST00000532602 ACTR1BP42025 376 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms