RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CCZ1BP86790 482 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 CCZ1P86791 482 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-204ENST00000532550 CCDC38Q502W7 563 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 GSTA5Q7RTV2 222 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 PRUNE1Q86TP1 453 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 CACNA2D3Q8IZS8 1091 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-204ENST00000532550 HM13Q8TCT9 377 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 ZNF768Q9H5H4 540 aaKnown RBP16.84■□□□□ 0.29
PHRF1-204ENST00000532550 APMAPQ9HDC9 416 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 PILRAQ9UKJ1 303 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 ZKSCAN5Q9Y2L8 839 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 PPP2R2CQ9Y2T4 447 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 HEBP2Q9Y5Z4 205 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 KIF1CO43896 1103 aaKnown RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 CEP104O60308 925 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 RAD1O60671 282 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 PRB1P04280 392 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 APRTP07741 180 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 PRSS56P0CW18 603 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 ADRA1DP25100 572 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 MAP4P27816 1152 aaKnown RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 C19orf57Q0VDD7 668 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 SEMA5AQ13591 1074 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 COL9A2Q14055 689 aaPredicted RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 CAPRIN2Q6IMN6 1127 aaKnown RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 DRICH1Q6PGQ1 229 aaPredicted RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 PCSK4Q6UW60 755 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 C4orf22Q6V702 233 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 PRSS42Q7Z5A4 293 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 TTC9Q92623 222 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 TTC1Q99614 292 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 TLR10Q9BXR5 811 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 HRASLS2Q9NWW9 162 aa16.83■□□□□ 0.28
PHRF1-204ENST00000532550 FASNP49327 2511 aaKnown RBP16.83■□□□□ 0.28
PHRF1-204ENST00000532550 IFRD1O00458 451 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 AP2A2O94973 939 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 GSTM1P09488 218 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 PSMA3P25788 255 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 NDUFS1P28331 727 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 RPL22P35268 128 aaKnown RBP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 GRIA1P42261 906 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 NSG1P42857 185 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 GSTM4Q03013 218 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 DBN1Q16643 649 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 ARMC6Q6NXE6 501 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 NLRP9Q7RTR0 991 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 PIANPQ8IYJ0 282 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 NLGN4XQ8N0W4 816 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 LILRA3Q8N6C8 439 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 CLDN19Q8N6F1 224 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 GLIS1Q8NBF1 620 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 NLGN4YQ8NFZ3 816 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 KLHL6Q8WZ60 621 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 UBXN4Q92575 508 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 OR6C1Q96RD1 312 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 FERD3LQ96RJ6 166 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 RANBP9Q96S59 729 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 SPRY4Q9C004 299 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 TRIT1Q9H3H1 467 aaKnown RBP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 KIR3DX1Q9H7L2 352 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 CASS4Q9NQ75 786 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 HOMER3Q9NSC5 361 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
PHRF1-204ENST00000532550 SLC24A2Q9UI40 661 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 PCDHGA4Q9Y5G9 962 aa16.82■□□□□ 0.28
PHRF1-204ENST00000532550 UBA6A0AVT1 1052 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-204ENST00000532550 CCDC162PA2VCL2 907 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 QSOX1O00391 747 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 STK17BO94768 372 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 ZSCAN5DPP0CG00 497 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 CXCR5P32302 372 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 ARL4DP49703 201 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 SH3BP2P78314 561 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 ITIH4Q14624 930 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 IL11RAQ14626 422 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 DNTTIP2Q5QJE6 756 aaKnown RBP16.81■□□□□ 0.28
PHRF1-204ENST00000532550 TSTD2Q5T7W7 516 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 LYPLAL1Q5VWZ2 237 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 DUS1LQ6P1R4 473 aaKnown RBP16.81■□□□□ 0.28
PHRF1-204ENST00000532550 CYB5D1Q6P9G0 228 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 XKR5Q6UX68 686 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 MICALCLQ6ZW33 695 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 OOSP2Q86WS3 158 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 OR6P1Q8NGX9 317 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 HDAC10Q969S8 669 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 RMDN2Q96LZ7 410 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 COG4Q9H9E3 785 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 RIMKLBQ9ULI2 386 aa16.81■□□□□ 0.28
PHRF1-204ENST00000532550 TMEM184BQ9Y519 407 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-204ENST00000532550 OR6C74A6NCV1 312 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 OR5K3A6NET4 321 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 OR51F1A6NGY5 319 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 NELFEP18615 380 aaKnown RBP16.8■□□□□ 0.28
PHRF1-204ENST00000532550 PPARGP37231 505 aaPredicted RBP16.8■□□□□ 0.28
PHRF1-204ENST00000532550 KCNJ1P48048 391 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 CD151P48509 253 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms