RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SMAPO00193 183 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 QSOX1O00391 747 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 PRMT5O14744 637 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 GPC4O75487 556 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 DXOO77932 396 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 S1PR4O95977 384 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 MTHFD1P11586 935 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.236e-8■■■■■ 37.4
TSPAN4-220ENST00000532375 ACADLP28330 430 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 CCR7P32248 378 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 CD151P48509 253 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 TTPAP49638 278 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 INHBCP55103 352 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 RPA4Q13156 261 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 AARS2Q5JTZ9 985 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 CTSL3PQ5NE16 218 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 NEPROQ6NW34 567 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 DUS1LQ6P1R4 473 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 CASC4Q6P4E1 433 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 WDR74Q6RFH5 385 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 IGF2-ASQ6U949 168 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 NAPRTQ6XQN6 538 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 CILP2Q8IUL8 1156 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 RBM12BQ8IXT5 1001 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 OR4D9Q8NGE8 314 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 STAMBPL1Q96FJ0 436 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 SNF8Q96H20 258 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 TMEM74Q96NL1 305 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 TCF12Q99081 682 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 TRIM31Q9BZY9 425 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 SYNDIG1Q9H7V2 258 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 GRHL1Q9NZI5 618 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 CFAP20Q9Y6A4 193 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 TEX264Q9Y6I9 313 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 E7ESA3 106 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 LIN7AO14910 233 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 URI1O94763 535 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 MPOP05164 745 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 F7P08709 466 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 OR56A5P0C7T3 313 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 THRAP10827 490 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 OGNP20774 298 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 AOAHP28039 575 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 HALP42357 657 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 PREPP48147 710 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 ADARP55265 1226 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 BIRC2Q13490 618 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 TRADDQ15628 312 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 ARHGAP22Q7Z5H3 698 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 VRK3Q8IV63 474 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 ZFPM2Q8WW38 1151 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 CXorf40BQ96DE9 158 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 C12orf66Q96MD2 445 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 TTC1Q99614 292 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 NRTNQ99748 197 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 STN1Q9H668 368 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 POLR1BQ9H9Y6 1135 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 EPB41L5Q9HCM4 733 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 ASCL3Q9NQ33 180 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 SAMD15Q9P1V8 674 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 ANAPC5Q9UJX4 755 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 SATB2Q9UPW6 733 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 MED16Q9Y2X0 877 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 PCDHGA8Q9Y5G5 932 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 MAD1L1Q9Y6D9 718 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 USP24Q9UPU5 2620 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 CELSR3Q9NYQ7 3312 aa13.61□□□□□ -0.23
TSPAN4-220ENST00000532375 CCDC187A0A096LP49 1063 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 TMEM8BA6NDV4 472 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 TMX2-CTNND1H3BSU7 103 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 ZW10O43264 779 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 BRINP1O60477 761 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 NDUFS3O75489 264 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 C9P02748 559 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 FTH1P02794 183 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 TUBB4AP04350 444 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 TPBGLP0DKB5 382 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 ITGB6P18564 788 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 PGAM1P18669 254 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 MPSTP25325 297 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 CRYMQ14894 314 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 STEAP4Q687X5 459 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 MRNIPQ6NTE8 343 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 LRRC6Q86X45 466 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 PROSER1Q86XN7 944 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 DENND6AQ8IWF6 608 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 KRT222Q8N1A0 295 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 OR10G6Q8NH81 332 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 WDR36Q8NI36 951 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 NCSTNQ92542 709 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms