RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TNFRSF8P28908 595 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 BRD3Q15059 726 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 ZNF658BQ4V348 819 aaPredicted RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 CCDC157Q569K6 752 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 GUSBP11Q6P575 273 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 OTOAQ7RTW8 1153 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 EFL1Q7Z2Z2 1120 aaKnown RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 TRIM48Q8IWZ4 208 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 SFRP1Q8N474 314 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 LILRA3Q8N6C8 439 aaPredicted RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 IFI44Q8TCB0 444 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 SLC37A2Q8TED4 501 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 FBF1Q8TES7 1133 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 ASZ1Q8WWH4 475 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 TMEM159Q96B96 161 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 SARS2Q9NP81 518 aaKnown RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 SCHIP1Q9P0W5 487 aaPredicted RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 TXNDC16Q9P2K2 825 aa21.83■■□□□ 1.09
LRRK1-208ENST00000532029 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 APOBEC2Q9Y235 224 aaKnown RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 V9GYY5 206 aaPredicted RBP21.83■■□□□ 1.09
LRRK1-208ENST00000532029 BPTFQ12830 3046 aa21.83■■□□□ 1.08
LRRK1-208ENST00000532029 RHPN2P1A8MT19 583 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 AHSGP02765 367 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 BRAFP15056 766 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 GLB1P16278 677 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 CCR7P32248 378 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 PREPP48147 710 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 ACADVLP49748 655 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 CSE1LP55060 971 aaKnown RBP21.82■■□□□ 1.08
LRRK1-208ENST00000532029 NAPRTQ6XQN6 538 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 STRA8Q7Z7C7 330 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 CTAGE3PQ8IX95 158 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 GSPT2Q8IYD1 628 aaKnown RBP21.82■■□□□ 1.08
LRRK1-208ENST00000532029 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.82■■□□□ 1.08
LRRK1-208ENST00000532029 CXorf40BQ96DE9 158 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 LRIT1Q9P2V4 623 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 WDR37Q9Y2I8 494 aa21.82■■□□□ 1.08
LRRK1-208ENST00000532029 SLC5A10A0PJK1 596 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 FAM159BA6NKW6 160 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 OR52A4PA6NMU1 304 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 IFRD1O00458 451 aaPredicted RBP21.81■■□□□ 1.08
LRRK1-208ENST00000532029 NUDT21O43809 227 aaKnown RBP21.81■■□□□ 1.08
LRRK1-208ENST00000532029 RFPL3O75679 317 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 VIPP01282 170 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 AOAHP28039 575 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 GABRB3P28472 473 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 HSPA14Q0VDF9 509 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 ILKQ13418 452 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 CLCA4Q14CN2 919 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 ZNF549Q6P9A3 640 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 XKR5Q6UX68 686 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 C12orf66Q96MD2 445 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 AARSD1Q9BTE6 412 aaKnown RBP21.81■■□□□ 1.08
LRRK1-208ENST00000532029 SMYD2Q9NRG4 433 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 CPNE7Q9UBL6 633 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 CORO1CQ9ULV4 474 aaPredicted RBP21.81■■□□□ 1.08
LRRK1-208ENST00000532029 PCDHGA1Q9Y5H4 931 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 RNF215Q9Y6U7 377 aa21.81■■□□□ 1.08
LRRK1-208ENST00000532029 ZFC3H1O60293 1989 aaKnown RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 ACSL3O95573 720 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 FAM153BP0C7A2 387 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 FTH1P19P0C7X4 201 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 XRCC1P18887 633 aaPredicted RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 PDHA2P29803 388 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 ABCG1P45844 678 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 FASLGP48023 281 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 HHEXQ03014 270 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 ILF2Q12905 390 aaKnown RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 NAB1Q13506 487 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 RPE65Q16518 533 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 KBTBD12Q3ZCT8 623 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 FAM153CQ494X1 144 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 PLEKHS1Q5SXH7 462 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 CCNI2Q6ZMN8 369 aaPredicted RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 TRMT10CQ7L0Y3 403 aaKnown RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 PPM1NQ8N819 430 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 GPATCH11Q8N954 259 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 KCNJ9Q92806 393 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 CCDC74AQ96AQ1 378 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 SH3KBP1Q96B97 665 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 FAM136AQ96C01 138 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 RMDN2Q96LZ7 410 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 OR52A5Q9H2C5 316 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 POT1Q9NUX5 634 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 IMP3Q9NV31 184 aaKnown RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 ZNF624Q9P2J8 865 aaPredicted RBP21.8■■□□□ 1.08
LRRK1-208ENST00000532029 PSAT1Q9Y617 370 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 CEP250Q9BV73 2442 aa21.8■■□□□ 1.08
LRRK1-208ENST00000532029 ARID1BQ8NFD5 2236 aaPredicted RBP21.79■■□□□ 1.08
LRRK1-208ENST00000532029 CXorf49A8MYA2 514 aaPredicted RBP21.79■■□□□ 1.08
LRRK1-208ENST00000532029 ZW10O43264 779 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 VPS26AO75436 327 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 PIAS1O75925 651 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 GP1BAP07359 652 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 MYBL2P10244 700 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 MCM3P25205 808 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 SLC19A1P41440 591 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 PMS2P54278 862 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 ERCC6LQ2NKX8 1250 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms