RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 PCDHGA6Q9Y5G7 932 aa16.43■□□□□ 0.22
CPSF1-207ENST00000531727 DUSP10Q9Y6W6 482 aa16.43■□□□□ 0.22
CPSF1-207ENST00000531727 TLN1Q9Y490 2541 aaKnown RBP16.43■□□□□ 0.22
CPSF1-207ENST00000531727 UBR5O95071 2799 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 KATNA1O75449 491 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 TJP3O95049 919 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 IPO7O95373 1038 aaKnown RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 SLC35G4P0C7Q5 338 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 EBLN1P0CF75 366 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 RALBP11234 206 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ARL4DP49703 201 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ZNF140P52738 457 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 NAP1L1P55209 391 aaKnown RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ACY1Q03154 408 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 DNASE1L3Q13609 305 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ERV3-1Q14264 604 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 SKIDA1Q1XH10 827 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 DENND5AQ6IQ26 1287 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 PWWP2BQ6NUJ5 590 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 BPHLQ86WA6 291 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 OOSP2Q86WS3 158 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 TMTC1Q8IUR5 882 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 D2HGDHQ8N465 521 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 SPDYE1Q8NFV5 336 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 OR13C4Q8NGS5 318 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 CT55Q8WUE5 264 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ALG3Q92685 438 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 DCUN1D1Q96GG9 259 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 RMDN2Q96LZ7 410 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 TBL1YQ9BQ87 522 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 KIR3DX1Q9H7L2 352 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ARNT2Q9HBZ2 717 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 LHX9Q9NQ69 397 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ZNF71Q9NQZ8 489 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 FAM8A1Q9UBU6 413 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 CRLS1Q9UJA2 301 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 ANAPC2Q9UJX6 822 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 REXO2Q9Y3B8 237 aaKnown RBP16.42■□□□□ 0.22
CPSF1-207ENST00000531727 KCNMB2Q9Y691 235 aa16.42■□□□□ 0.22
CPSF1-207ENST00000531727 UBA6A0AVT1 1052 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-207ENST00000531727 ZNF189O75820 626 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-207ENST00000531727 RECKO95980 971 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 FURINP09958 794 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 HADHAP40939 763 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 CASRP41180 1078 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 ZNF75DP51815 510 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 HSD11B2P80365 405 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 CAPRIN2Q6IMN6 1127 aaKnown RBP16.41■□□□□ 0.22
CPSF1-207ENST00000531727 AADACL2Q6P093 401 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 CERS6Q6ZMG9 384 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 KLHDC8BQ8IXV7 354 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 CFAP206Q8IYR0 622 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 CARFQ8N187 725 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 NXPE1Q8N323 547 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 LRRC57Q8N9N7 239 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 HM13Q8TCT9 377 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 HEXDCQ8WVB3 486 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 MRFAP1L1Q96HT8 127 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 LACRTQ9GZZ8 138 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 EPN3Q9H201 632 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 FAM96AQ9H5X1 160 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 FGF21Q9NSA1 209 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 FEZ2Q9UHY8 353 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-207ENST00000531727 POLHQ9Y253 713 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 COLEC10Q9Y6Z7 277 aa16.41■□□□□ 0.22
CPSF1-207ENST00000531727 FLNBO75369 2602 aaKnown RBP16.41■□□□□ 0.22
CPSF1-207ENST00000531727 OR6C74A6NCV1 312 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 C21orf140B9A014 251 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 CFAP99D6REC4 459 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 ARHGAP6O43182 974 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 CREG1O75629 220 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 ZBTB11O95625 1053 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-207ENST00000531727 POLBP06746 335 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 ITGALP20701 1170 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 PRLHRP49683 370 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 TMPRSS15P98073 1019 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 GSE1Q14687 1217 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 LACTB2Q53H82 288 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-207ENST00000531727 ARMC6Q6NXE6 501 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 RAD9BQ6WBX8 426 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 SNX20Q7Z614 316 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 LILRA3Q8N6C8 439 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-207ENST00000531727 LRRC45Q96CN5 670 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 COPS8Q99627 209 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 CCM2Q9BSQ5 444 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 HEBP2Q9Y5Z4 205 aa16.4■□□□□ 0.22
CPSF1-207ENST00000531727 C17orf113A0A1B0GUU1 675 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 GRID2IPA4D2P6 1211 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 LDB2O43679 373 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 NTRK1P04629 796 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 ATP1B2P14415 290 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-207ENST00000531727 NDUFS1P28331 727 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 KPNA2P52292 529 aaKnown RBP16.39■□□□□ 0.21
CPSF1-207ENST00000531727 VAV2P52735 878 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 TUBB4BP68371 445 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 TUBB2AQ13885 445 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 SPARCL1Q14515 664 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 KRT33BQ14525 404 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 GPR33Q49SQ1 333 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 TMEM135Q86UB9 458 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms