RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TDRD1Q9BXT4 1180 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 OSBPL8Q9BZF1 889 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 BRD8Q9H0E9 1235 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SLC25A18Q9H1K4 315 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PCDH9Q9HC56 1237 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 FAM53CQ9NYF3 392 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SIRPGQ9P1W8 387 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 GULP1Q9UBP9 304 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CD84Q9UIB8 345 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 AMFRQ9UKV5 643 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZFC3H1O60293 1989 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 LRBAP50851 2863 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PRAMEF33A0A0G2JMD5 474 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 A0A1W2PQM1 296 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCDC66A2RUB6 948 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 CFAP69A5D8W1 941 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TMEM202A6NGA9 273 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 ANKRD66B4E2M5 251 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 NTN3O00634 580 aaPredicted RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PPP1R12AO14974 1030 aaPredicted RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 YY2O15391 372 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PRAMEF10O60809 474 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PPFIA2O75334 1257 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TCEA3O75764 348 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PIRTP0C851 137 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 RAC2P15153 192 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 RBL1P28749 1068 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 VIPR1P32241 457 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TRHRP34981 398 aaPredicted RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TRIM23P36406 574 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 YPEL5P62699 121 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCL7P80098 99 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 OTUD4Q01804 1114 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 SPIDRQ14159 915 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 GALNT3Q14435 633 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PPP2R5EQ16537 467 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 MLANAQ16655 118 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 MANEAQ5SRI9 462 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 FBXW10Q5XX13 1052 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 LRRC66Q68CR7 880 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PNCKQ6P2M8 343 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 ENPP7Q6UWV6 458 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PID1Q7Z2X4 250 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 RD3Q7Z3Z2 195 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PEX26Q7Z412 305 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TECPR1Q7Z6L1 1165 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PARGQ86W56 976 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 DCP2Q8IU60 420 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 SFTPA2Q8IWL1 248 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF567Q8N184 647 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 SDR16C5Q8N3Y7 309 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 Q8N9G6 341 aaPredicted RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 KYQ8NBH2 561 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 DENND6BQ8NEG7 585 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 LPCAT1Q8NF37 534 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 ACTL9Q8TC94 416 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TFB1MQ8WVM0 346 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TADA1Q96BN2 335 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TCTN2Q96GX1 697 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 HES6Q96HZ4 224 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 RBM41Q96IZ5 413 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 TRIB3Q96RU7 358 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 WDR24Q96S15 920 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 AGAP2Q99490 1192 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 LRRC61Q9BV99 259 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 CLPBQ9H078 707 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 GLOD4Q9HC38 313 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 LZTFL1Q9NQ48 299 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 MRPL40Q9NQ50 206 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 GEMIN8Q9NWZ8 242 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 AMACRQ9UHK6 382 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PADI4Q9UM07 663 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PLAAQ9Y263 795 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 R3HDM2Q9Y2K5 976 aaKnown RBP6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF281Q9Y2X9 895 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 LOXL2Q9Y4K0 774 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 PCDHGA7Q9Y5G6 932 aa6.94□□□□□ -1.3
TRIM53CP-201ENST00000531490 A0A1W2PQ67 120 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 CLEC18AA5D8T8 446 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 D6RAR5 112 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 H7C0C1 242 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 APOC4-APOC2K7ER74 178 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 AURKAO14965 403 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 PMPCBO75439 489 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 SOD1P00441 154 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 APOC2P02655 101 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 RPLP0P05388 317 aaKnown RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 LIPCP11150 499 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 TSHRP16473 764 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 ATP5OP48047 213 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 THOP1P52888 689 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 EPHB1P54762 984 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 INHBCP55103 352 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 NOMO1Q15155 1222 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 KCTD19Q17RG1 926 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 ALG11Q2TAA5 492 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms