RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 FAM69BQ5VUD6 431 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 HIST2H2BCQ6DN03 193 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 BZW1Q7L1Q6 419 aaKnown RBP17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 SYVN1Q86TM6 617 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 BPHLQ86WA6 291 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 OOSP2Q86WS3 158 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 ZNF501Q96CX3 271 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 CCDC42Q96M95 316 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 FCRL5Q96RD9 977 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 CD180Q99467 661 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 GOLPH3Q9H4A6 298 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 ABHD10Q9NUJ1 306 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 SLC24A2Q9UI40 661 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 FARSAQ9Y285 508 aaKnown RBP17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 ARL5AQ9Y689 179 aa17.97■□□□□ 0.47
SSSCA1-206ENST00000531405 PRAMEF1O95521 474 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 ZBTB11O95625 1053 aaPredicted RBP17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 TPM3P06753 285 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 HLA-DPA1P20036 260 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 CCL11P51671 97 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 PGDP52209 483 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 PDE1BQ01064 536 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 LONRF2Q1L5Z9 754 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 LCN10Q6JVE6 187 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 DAAM2Q86T65 1068 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 LILRA3Q8N6C8 439 aaPredicted RBP17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 CPT1CQ8TCG5 803 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 ZNF398Q8TD17 642 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 THAP4Q8WY91 577 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 SEC14L1Q92503 715 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 P3H4Q92791 437 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 RMDN2Q96LZ7 410 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 SLC25A23Q9BV35 468 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 FSD1LQ9BXM9 530 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 TLR10Q9BXR5 811 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 ING2Q9H160 280 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 CHST8Q9H2A9 424 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 C10orf88Q9H8K7 445 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 LRRC4CQ9HCJ2 640 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 KCND1Q9NSA2 647 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 SMOXQ9NWM0 555 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 SOHLH2Q9NX45 425 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 NOTCH2Q04721 2471 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 ITPR2Q14571 2701 aa17.96■□□□□ 0.47
SSSCA1-206ENST00000531405 MGAT4DA6NG13 374 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 STX7O15400 261 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 VPS4BO75351 444 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 AGTP01019 485 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 POLBP06746 335 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 PTGIRP43119 386 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 MPP3Q13368 585 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 OLIG2Q13516 323 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 TRIM14Q14142 442 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 CAPRIN2Q6IMN6 1127 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 ARMC6Q6NXE6 501 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 LURAP1LQ8IV03 231 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 EFCAB3Q8N7B9 438 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 OR2L2Q8NH16 312 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 GORASP1Q9BQQ3 440 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 FICDQ9BVA6 458 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 KIR3DX1Q9H7L2 352 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 ACSS2Q9NR19 701 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 RSPH14Q9UHP6 348 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 VPS4AQ9UN37 437 aa17.95■□□□□ 0.46
SSSCA1-206ENST00000531405 ANKRD12Q6UB98 2062 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 PSTPIP1O43586 416 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 SGTAO43765 313 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 MFAP3LO75121 409 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 LCA5LO95447 670 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 SLC35G4P0C7Q5 338 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 POLR2CP19387 275 aaPredicted RBP17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 MARCKSL1P49006 195 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 ABRQ12979 859 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 TFDP3Q5H9I0 405 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 TMTC4Q5T4D3 741 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 ZNF517Q6ZMY9 492 aaPredicted RBP17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 ENDOVQ8N8Q3 282 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 OR4E2Q8NGC2 313 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 OR4K2Q8NGD2 314 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 VAT1Q99536 393 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 NRTNQ99748 197 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 ASB8Q9H765 288 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 MLXIPLQ9NP71 852 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 FKBPLQ9UIM3 349 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 ACSL5Q9ULC5 683 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 BTRCQ9Y297 605 aa17.94■□□□□ 0.46
SSSCA1-206ENST00000531405 hCG_1818297A0A087WSY0 165 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 SLC9B1P1A6NJY1 282 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 SRP72O76094 671 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 AGFG2O95081 481 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 GSE1Q14687 1217 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 C4orf17Q53FE4 359 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 PLEKHS1Q5SXH7 462 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 IZUMO3Q5VZ72 239 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 CCDC50Q8IVM0 306 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 CFAP206Q8IYR0 622 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 GALNT11Q8NCW6 608 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms