RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 ZNF592Q92610 1267 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 SH3KBP1Q96B97 665 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 FCRL3Q96P31 734 aaPredicted RBP18.31■□□□□ 0.52
GMDS-208ENST00000530927 TRIM51Q9BSJ1 452 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 CATSPERZQ9NTU4 200 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 SOX13Q9UN79 622 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 PIKFYVEQ9Y2I7 2098 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 CDRT15L2A8MXV6 281 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 CD3EAPO15446 510 aaKnown RBP18.3■□□□□ 0.52
GMDS-208ENST00000530927 VAPBO95292 243 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 SLC35G4P0C7Q5 338 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 RBMS1P29558 406 aaKnown RBP18.3■□□□□ 0.52
GMDS-208ENST00000530927 EIF2S3P41091 472 aaKnown RBP18.3■□□□□ 0.52
GMDS-208ENST00000530927 NSG1P42857 185 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 LEPRP48357 1165 aaKnown RBP18.3■□□□□ 0.52
GMDS-208ENST00000530927 MAPK10P53779 464 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 EPHA4P54764 986 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 CSE1LP55060 971 aaKnown RBP18.3■□□□□ 0.52
GMDS-208ENST00000530927 ITIH4Q14624 930 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 CASC4Q6P4E1 433 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 SPNS2Q8IVW8 549 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 FGF11Q92914 225 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.3■□□□□ 0.52
GMDS-208ENST00000530927 OCIAD1Q9NX40 245 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 ASIC3Q9UHC3 531 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 NBEAQ8NFP9 2946 aa18.3■□□□□ 0.52
GMDS-208ENST00000530927 PKD1L2Q7Z442 2459 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 ITPR1Q14643 2758 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 ACACAQ13085 2346 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 ZW10O43264 779 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 JMJD7P0C870 316 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 PTK6Q13882 451 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 CAPRIN2Q6IMN6 1127 aaKnown RBP18.29■□□□□ 0.52
GMDS-208ENST00000530927 JAMLQ86YT9 394 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 KRT222Q8N1A0 295 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 PHC3Q8NDX5 983 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 MCUQ8NE86 351 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 SNIP1Q8TAD8 396 aaKnown RBP18.29■□□□□ 0.52
GMDS-208ENST00000530927 PEX13Q92968 403 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 RNF31Q96EP0 1072 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 ZNF578Q96N58 590 aaPredicted RBP18.29■□□□□ 0.52
GMDS-208ENST00000530927 PWWP2AQ96N64 755 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 TGM7Q96PF1 710 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 OR52A5Q9H2C5 316 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 UCK1Q9HA47 277 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 FOXJ2Q9P0K8 574 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 RNF14Q9UBS8 474 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 RALYQ9UKM9 306 aaKnown RBP18.29■□□□□ 0.52
GMDS-208ENST00000530927 ACSL5Q9ULC5 683 aa18.29■□□□□ 0.52
GMDS-208ENST00000530927 TMX2-CTNND1H3BSU7 103 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 DNALI1O14645 258 aaPredicted RBP18.28■□□□□ 0.52
GMDS-208ENST00000530927 TTI1O43156 1089 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 KIF1CO43896 1103 aaKnown RBP18.28■□□□□ 0.52
GMDS-208ENST00000530927 AP2A2O94973 939 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 FGF3P11487 239 aaPredicted RBP18.28■□□□□ 0.52
GMDS-208ENST00000530927 AMD1P17707 334 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 IVDP26440 423 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 MAGEA3P43357 314 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 ARCN1P48444 511 aaKnown RBP18.28■□□□□ 0.52
GMDS-208ENST00000530927 WDR74Q6RFH5 385 aaPredicted RBP18.28■□□□□ 0.52
GMDS-208ENST00000530927 PPIL6Q8IXY8 311 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 OTUD6BQ8N6M0 293 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 ELMO1Q92556 727 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 USP7Q93009 1102 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.28■□□□□ 0.522e-6■■■■■ 34.9
GMDS-208ENST00000530927 CMKLR1Q99788 373 aa18.28■□□□□ 0.52
GMDS-208ENST00000530927 MRM3Q9HC36 420 aaKnown RBP18.28■□□□□ 0.52
GMDS-208ENST00000530927 C17orf113A0A1B0GUU1 675 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 C9orf172C9J069 976 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 AP3B1O00203 1094 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 PRAMEF10O60809 474 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 ITGA2BP08514 1039 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 SLC5A2P31639 672 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 SARNPP82979 210 aaKnown RBP18.27■□□□□ 0.52
GMDS-208ENST00000530927 EIF3IQ13347 325 aaKnown RBP18.27■□□□□ 0.52
GMDS-208ENST00000530927 BOP1Q14137 746 aaKnown RBP18.27■□□□□ 0.52
GMDS-208ENST00000530927 PLCL1Q15111 1095 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 CLPPQ16740 277 aaPredicted RBP18.27■□□□□ 0.52
GMDS-208ENST00000530927 MSS51Q4VC12 460 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 IZUMO3Q5VZ72 239 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 IGF2-ASQ6U949 168 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 FAM92BQ6ZTR7 304 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 LSMEM2Q8N112 164 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 AVL9Q8NBF6 648 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 SLCO2A1Q92959 643 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 ZNF669Q96BR6 464 aaPredicted RBP18.27■□□□□ 0.52
GMDS-208ENST00000530927 SGSM3Q96HU1 749 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 THSD1Q9NS62 852 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 PDP2Q9P2J9 529 aa18.27■□□□□ 0.52
GMDS-208ENST00000530927 URB1O60287 2271 aaKnown RBP18.27■□□□□ 0.51
GMDS-208ENST00000530927 CACNA1BQ00975 2339 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 CAPN5O15484 640 aaPredicted RBP18.26■□□□□ 0.51
GMDS-208ENST00000530927 MLNP12872 115 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 CCR7P32248 378 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 CAPZBP47756 277 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 ERVPABLB-1P60509 514 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 DR1Q01658 176 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 TUBB2AQ13885 445 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 ANKRD20A4Q4UJ75 823 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms