RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ASMTLO95671 621 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 PRLP01236 227 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 TRBC1P01850 177 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 DESP17661 470 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 DLSTP36957 453 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 RPL21P46778 160 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 KCNJ1P48048 391 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 HCAR3P49019 387 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 PPM1FP49593 454 aaPredicted RBP8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 RENBPP51606 427 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 STC1P52823 247 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 IFFO1Q0D2I5 559 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 UAP1Q16222 522 aaPredicted RBP8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 SMTNL2Q2TAL5 461 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 TTMPQ5BVD1 217 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 TFDP3Q5H9I0 405 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 CEP85LQ5SZL2 805 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 CAPRIN2Q6IMN6 1127 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 HOOK3Q86VS8 718 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 GALNT13Q8IUC8 556 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 GALNT6Q8NCL4 622 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 FBXO25Q8TCJ0 367 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 C1orf54Q8WWF1 131 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 PLEKHG4BQ96PX9 1271 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 TMEM109Q9BVC6 243 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 PRDM8Q9NQV8 689 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 KCTD5Q9NXV2 234 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 ASIC3Q9UHC3 531 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 ZNHIT2Q9UHR6 403 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 TLK1Q9UKI8 766 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 SLC30A1Q9Y6M5 507 aa8.41□□□□□ -1.06
TGFBR3-208ENST00000529608 A0A1W2PQ67 120 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 KIF1CO43896 1103 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 SNX2O60749 519 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 KRT14P02533 472 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 C9P02748 559 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 KRT1P04264 644 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ACP5P13686 325 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 F3P13726 295 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 TYRP1P17643 537 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 COL8A1P27658 744 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 PCK1P35558 622 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 MMP13P45452 471 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 LEPRP48357 1165 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 SEPHS1P49903 392 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 UBE2IP63279 158 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 DSC2Q02487 901 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 FOXM1Q08050 763 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ZNF844Q08AG5 666 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 LRP8Q14114 963 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 MAP7Q14244 749 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 NADK2Q4G0N4 442 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ZFYVE27Q5T4F4 411 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ARMC12Q5T9G4 340 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 MFSD7Q6UXD7 560 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 TREML4Q6UXN2 200 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ASB18Q6ZVZ8 466 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ZNF765Q7L2R6 523 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 NLRP8Q86W28 1048 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 CCDC13Q8IYE1 715 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ESX1Q8N693 406 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 TEX26Q8N6G2 289 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 TEX19Q8NA77 164 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 EID2BQ96D98 161 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ELMO2Q96JJ3 720 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 C9orf72Q96LT7 481 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 CSPG4P5Q96PW8 444 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ZPBPQ9BS86 351 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 EFHD1Q9BUP0 239 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 HEMGNQ9BXL5 484 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 CAPS2Q9BXY5 557 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ULBP3Q9BZM4 244 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ROPN1BQ9BZX4 212 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 STMN4Q9H169 189 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ROPN1Q9HAT0 212 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 PRM3Q9NNZ6 103 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 NT5MQ9NPB1 228 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 DONSONQ9NYP3 566 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ZNF624Q9P2J8 865 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 SLC23A2Q9UGH3 650 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 ANAPC5Q9UJX4 755 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 KCTD3Q9Y597 815 aa8.4□□□□□ -1.06
TGFBR3-208ENST00000529608 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 A1L4Q6 167 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 CDC14CA4D256 554 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 LIASO43766 372 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 PRPSAP2O60256 369 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 KATNA1O75449 491 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 KIAA0754O94854 1291 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 CD48P09326 243 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 ANKRD34CP0C6C1 535 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 IL4RP24394 825 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 IVDP26440 423 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 EPHA4P54764 986 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 PPP1CAP62136 330 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 RPS18P62269 152 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms