RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CD1DP15813 335 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 KCNC1P48547 511 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 SIM2Q14190 667 aaPredicted RBP24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 CYHR1Q6ZMK1 362 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 C11orf74Q86VG3 221 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 PTERQ96BW5 349 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 ZC3H10Q96K80 434 aaKnown RBP24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 SSU72Q9NP77 194 aaKnown RBP24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 PLLPQ9Y342 182 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 KMT2EQ8IZD2 1858 aa24.25■■□□□ 1.47
LDLRAD3-203ENST00000528989 SPAG17Q6Q759 2223 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 SLC5A10A0PJK1 596 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 F8W8V4 182 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PRPF4O43172 522 aaKnown RBP eCLIP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 APOA4P06727 396 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 DGKAP23743 735 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 CNR2P34972 360 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PPP2R2AP63151 447 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 GBX1Q14549 363 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PRR23BQ6ZRT6 265 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 ISCA2Q86U28 154 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 FSTL5Q8N475 847 aaPredicted RBP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 NKAPQ8N5F7 415 aaKnown RBP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 FAM111AQ96PZ2 611 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 COG4Q9H9E3 785 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 C17orf113A0A1B0GUU1 675 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 CDC7O00311 574 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 SLCO2B1O94956 709 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 RASGRP1O95267 797 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 COL6A2P12110 1019 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 RPL10P27635 214 aaKnown RBP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 SLC26A3P40879 764 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 ATP1A2P50993 1020 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 AFF3P51826 1226 aaKnown RBP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 HK3P52790 923 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 FAM83EQ2M2I3 478 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 TTLL9Q3SXZ7 439 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 SYTL3Q4VX76 610 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PLEKHS1Q5SXH7 462 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 IQCHQ86VS3 1027 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 TMEM151AQ8N4L1 468 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 SPDYE1Q8NFV5 336 aaPredicted RBP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 FAM174AQ8TBP5 190 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 MGARPQ8TDB4 240 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PIGKQ92643 395 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 TMEM159Q96B96 161 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 MKS1Q9NXB0 559 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 CPSF2Q9P2I0 782 aaKnown RBP24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 KLHL42Q9P2K6 505 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PILRBQ9UKJ0 227 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 GRID1Q9ULK0 1009 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 PCDHGA2Q9Y5H1 932 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 R4GN57 208 aa24.24■■□□□ 1.47
LDLRAD3-203ENST00000528989 KPNA5O15131 536 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 GLRA3O75311 464 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 AK4P27144 223 aaPredicted RBP24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 GYS2P54840 703 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 OXR1Q8N573 874 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 SKA2Q8WVK7 121 aaPredicted RBP24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 OR2M4Q96R27 311 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 DERL2Q9GZP9 239 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 ALG9Q9H6U8 611 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 NMRAL1Q9HBL8 299 aa24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 SMG5Q9UPR3 1016 aaKnown RBP24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 DNMT3AQ9Y6K1 912 aaPredicted RBP24.23■■□□□ 1.47
LDLRAD3-203ENST00000528989 TFEBP19484 476 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 OVGP1Q12889 678 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 OR4D1Q15615 310 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 SEPT7Q16181 437 aaKnown RBP24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 AGAP9Q5VTM2 703 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 PARGQ86W56 976 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 HM13Q8TCT9 377 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 DENND1AQ8TEH3 1009 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 IQCGQ9H095 443 aaKnown RBP24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 OSGEPL1Q9H4B0 414 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 DNAJC28Q9NX36 388 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 PSMD13Q9UNM6 376 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 DGKBQ9Y6T7 804 aa24.22■■□□□ 1.47
LDLRAD3-203ENST00000528989 A0A1B0GVT2 93 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 TK2O00142 265 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 BTN3A1O00481 513 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 VILLO15195 856 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 SBK3P0C264 359 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 CTBSQ01459 385 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 ABRQ12979 859 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 TSNQ15631 228 aaKnown RBP24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 METRNLQ641Q3 311 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 LRRC8EQ6NSJ5 796 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 CCDC91Q7Z6B0 441 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 ARMC2Q8NEN0 867 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 PDLIM5Q96HC4 596 aaKnown RBP24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 SCYL1Q96KG9 808 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 ADAMTS6Q9UKP5 1117 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 ZNF318Q5VUA4 2279 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 NPEPPSL1A6NEC2 478 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 LIN7AO14910 233 aaPredicted RBP24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 CELA2BP08218 269 aaPredicted RBP24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 GSTA1P08263 222 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 RGS4P49798 205 aa24.21■■□□□ 1.47
LDLRAD3-203ENST00000528989 NXPH1P58417 271 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms