RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 CYP27C1Q4G0S4 372 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 SIRPB2Q5JXA9 342 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ITPRIPL1Q6GPH6 555 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC70Q6NSX1 233 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 IYDQ6PHW0 289 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 WDR74Q6RFH5 385 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 WASH2PQ6VEQ5 465 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 RAB11FIP2Q7L804 512 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ADGRG6Q86SQ4 1221 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 PIM3Q86V86 326 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ZC3H18Q86VM9 953 aaKnown RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF547Q8IVP9 402 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 SYCE1Q8N0S2 351 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ACRBPQ8NEB7 543 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 DDHD1Q8NEL9 900 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ACTL9Q8TC94 416 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 PATE1Q8WXA2 126 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 CRELD1Q96HD1 420 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 FCRL3Q96P31 734 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 CMKLR1Q99788 373 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 FERMT1Q9BQL6 677 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 SPATA16Q9BXB7 569 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 KRTAP4-2Q9BYR5 136 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 GPR63Q9BZJ6 419 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 FOXP3Q9BZS1 431 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 EPB41L1Q9H4G0 881 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 SYNDIG1Q9H7V2 258 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 TRIM39Q9HCM9 518 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 WASH6PQ9NQA3 447 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 IL17CQ9P0M4 197 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 KLHL8Q9P2G9 620 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ATXN10Q9UBB4 475 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 TBC1D29Q9UFV1 150 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 RALYQ9UKM9 306 aaKnown RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 TMPRSS11EQ9UL52 423 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 SHOC2Q9UQ13 582 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 LOXL2Q9Y4K0 774 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 DUSP10Q9Y6W6 482 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ZFC3H1O60293 1989 aaKnown RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF462Q96JM2 2506 aa6.96□□□□□ -1.3
ITGB1-218ENST00000528877 MN1Q10571 1320 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-218ENST00000528877 IGHV5-10-1A0A0J9YXX1 117 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 GAPDHSO14556 408 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 AURKAO14965 403 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 KMOO15229 486 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 DUX1O43812 170 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 TJP3O95049 919 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 SLC25A14O95258 325 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 EML2O95834 649 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ANKRD34CP0C6C1 535 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 JMJD7P0C870 316 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 LIPCP11150 499 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ACP5P13686 325 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF8P17098 575 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 CD82P27701 267 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 RBL1P28749 1068 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 SPAM1P38567 509 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 TNNT3P45378 269 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 GEMP55040 296 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 OR1D5P58170 312 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 OTUD4Q01804 1114 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 HHEXQ03014 270 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC173Q0VFZ6 552 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ITGA9Q13797 1035 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 C16orf72Q14CZ0 275 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ATP13A5Q4VNC0 1218 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 KHDC1Q4VXA5 237 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 SOWAHCQ53LP3 525 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 LDLRAP1Q5SW96 308 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 AGAP9Q5VTM2 703 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 BROXQ5VW32 411 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ALS2CLQ60I27 953 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 RANBP10Q6VN20 620 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF574Q6ZN55 896 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 B4GALNT4Q76KP1 1039 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 MARK2Q7KZI7 788 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 GPR155Q7Z3F1 870 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 GLT6D1Q7Z4J2 308 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 C11orf96Q7Z7L8 435 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 LRRTM4Q86VH4 590 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 RBM12BQ8IXT5 1001 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 FBXO39Q8N4B4 442 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 RNF10Q8N5U6 811 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 Q8N9G6 341 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 SH3KBP1Q96B97 665 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 HAUS1Q96CS2 278 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 RTP4Q96DX8 246 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 WBP1Q96G27 269 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 HES6Q96HZ4 224 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC74BQ96LY2 380 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 SPATA13Q96N96 652 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 NUDT22Q9BRQ3 303 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 DDA1Q9BW61 102 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 HEMGNQ9BXL5 484 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 FSD1LQ9BXM9 530 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 OR2AG1Q9H205 316 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms