RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RPIAP49247 311 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 CCR3P51677 355 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 GTF2A1P52655 376 aaPredicted RBP14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 AP1S2P56377 157 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 ERVPABLB-1P60509 514 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 EMX2Q04743 252 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 CCNIQ14094 377 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 ATP6AP1LQ52LC2 224 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 SAMD4BQ5PRF9 694 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 HENMT1Q5T8I9 393 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 TLDC1Q6P9B6 456 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 CYP2U1Q7Z449 544 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 TECPR1Q7Z6L1 1165 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 VN1R2Q8NFZ6 395 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 HMGCLL1Q8TB92 370 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 SLC26A7Q8TE54 656 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 ASZ1Q8WWH4 475 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 OR8D1Q8WZ84 308 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 NAF1Q96HR8 494 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 PPP3R2Q96LZ3 170 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 NPAS2Q99743 824 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 SLC29A3Q9BZD2 475 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 BRINP2Q9C0B6 783 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 EPHX3Q9H6B9 360 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 IPPKQ9H8X2 491 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 PARVBQ9HBI1 364 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 SPAG4Q9NPE6 437 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 AIG1Q9NVV5 245 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 SUCOQ9UBS9 1254 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 TRPS1Q9UHF7 1281 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 MCM8Q9UJA3 840 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 ZNF225Q9UK10 706 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 PCDHGA7Q9Y5G6 932 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 GPR45Q9Y5Y3 372 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 SLC28A1O00337 649 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 FBP2O00757 339 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 TAPBPO15533 448 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 BCAS2O75934 225 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 CYP2A7P20853 494 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 ATP6V1C1P21283 382 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 HMOX2P30519 316 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 AKT1P31749 480 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 CCR7P32248 378 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 B4GALNT1Q00973 533 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 KCNC3Q14003 757 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 TRIM25Q14258 630 aaKnown RBP14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 GRB7Q14451 532 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 FAM78AQ5JUQ0 283 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 C8orf82Q6P1X6 216 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 PAOXQ6QHF9 649 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 BLOC1S3Q6QNY0 202 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 PRR23BQ6ZRT6 265 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 ZNF765Q7L2R6 523 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 LRRC70Q7Z2Q7 622 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 NLRP8Q86W28 1048 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 FUNDC1Q8IVP5 155 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 NPAS3Q8IXF0 933 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 MINDY1Q8N5J2 469 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 MCOLN3Q8TDD5 553 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 KCNV2Q8TDN2 545 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 BTN2A2Q8WVV5 523 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 ASB11Q8WXH4 323 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 ASB9Q96DX5 294 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 PPP1R16AQ96I34 528 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 LRRC3BQ96PB8 259 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 KCNA7Q96RP8 456 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 SLC32A1Q9H598 525 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 NSUN3Q9H649 340 aaKnown RBP14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 FBRSL1Q9HCM7 1045 aaKnown RBP14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 C6orf203Q9P0P8 240 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 TIMM22Q9Y584 194 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 PLXNA2O75051 1894 aa14.5□□□□□ -0.09
ECHDC1-220ENST00000528402 OR7A17O14581 309 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 WNT9AO14904 365 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 ANGPT2O15123 496 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 RGS14O43566 566 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 SLC22A3O75751 556 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 BAG2O95816 211 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 CAPN1P07384 714 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 CTSLP07711 333 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 GSTM1P09488 218 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 ITGB7P26010 798 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 MMP12P39900 470 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 NRIP1P48552 1158 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 KCNK10P57789 538 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 SESN3P58005 492 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 GSTM4Q03013 218 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 ZNF33BQ06732 778 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 FLOT2Q14254 428 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 HNRNPA1L2Q32P51 320 aaKnown RBP14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 TCHHL1Q5QJ38 904 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 C6orf136Q5SQH8 315 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 TMC5Q6UXY8 1006 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 NUDT18Q6ZVK8 323 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 HSD11B1LQ7Z5J1 315 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 ADGRD2Q7Z7M1 963 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 DSG4Q86SJ6 1040 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 CDYL2Q8N8U2 506 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 OR4F6Q8NGB9 312 aa14.49□□□□□ -0.09
ECHDC1-220ENST00000528402 SORCS1Q8WY21 1168 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms