RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MIPEPQ99797 713 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 MOCS1Q9NZB8 636 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 MRPS33Q9Y291 106 aaKnown RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 KIR3DL1P43629 444 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 HNMTP50135 292 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 IZUMO2Q6UXV1 221 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 HTR3DQ70Z44 454 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 NET1Q7Z628 596 aaPredicted RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 DHDDSQ86SQ9 333 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CLHC1Q8NHS4 586 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 PROX1Q92786 737 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 NDEL1Q9GZM8 345 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 HPS4Q9NQG7 708 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 DLX3O60479 287 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 PPIBP23284 216 aaKnown RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 ELF3P78545 371 aaPredicted RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 SLC7A9P82251 487 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 NFATC2Q13469 925 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 MBTPS1Q14703 1052 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 RANBP10Q6VN20 620 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 EID3Q8N140 333 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 FITM2Q8N6M3 262 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 C10orf53Q8N6V4 93 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 GLMNQ92990 594 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 RAB11FIP5Q9BXF6 653 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 CD248Q9HCU0 757 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 VPS4AQ9UN37 437 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 PIP5K1BO14986 540 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 IFNA16P05015 189 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 CHRNGP07510 517 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 HSD17B2P37059 387 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 SLC7A2P52569 658 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 BNIP2Q12982 314 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 GK5Q6ZS86 529 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 PTCD3Q96EY7 689 aaKnown RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 HOPXQ9BPY8 73 aaPredicted RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 RTP3Q9BQQ7 232 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 RNF38Q9H0F5 515 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 GRXCR1A8MXD5 290 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 SIX3O95343 332 aaPredicted RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 ATP6V1C1P21283 382 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 GNA13Q14344 377 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 CCNYL2Q5T2Q4 361 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 NCEH1Q6PIU2 408 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 GPR135Q8IZ08 494 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 CPXM2Q8N436 756 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 EEF1AKMT1Q8WVE0 214 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 DERL2Q9GZP9 239 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 PRKAG3Q9UGI9 489 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 MYO7AQ13402 2215 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 CDC7O00311 574 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 OR10H2O60403 315 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 POU1F1P28069 291 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 GRIA3P42263 894 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 LEPRP48357 1165 aaKnown RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 OTUD3Q5T2D3 398 aaPredicted RBP14.84□□□□□ -0.03
USP47-207ENST00000527733 SCAMP4Q969E2 229 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 CNBD2Q96M20 576 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 NPAS2Q99743 824 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 TEKT2Q9UIF3 430 aa14.84□□□□□ -0.03
USP47-207ENST00000527733 HIDE1A8MVS5 230 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 GSTM1P09488 218 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 ECHS1P30084 290 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 IDH3AP50213 366 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 ERVFC1P60507 584 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 TRIM71Q2Q1W2 868 aaKnown RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 KBTBD6Q86V97 674 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 KIAA1191Q96A73 305 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 CEP19Q96LK0 163 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 POLR2AP24928 1970 aaKnown RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 PSMG1O95456 288 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 ANXA4P09525 319 aaPredicted RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 UBTFL6P0CB48 400 aaPredicted RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 NDUFS1P28331 727 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 CD68P34810 354 aaPredicted RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 POLR2JP52435 117 aaKnown RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 DAB2P98082 770 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 TRIM40Q6P9F5 258 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 STK32CQ86UX6 486 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 FBXO30Q8TB52 745 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 PYDC1Q8WXC3 89 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 MGME1Q9BQP7 344 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 SRMSQ9H3Y6 488 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 AP2A2O94973 939 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 KLF8O95600 359 aaPredicted RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 HMGCLP35914 325 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 ZNHIT3Q15649 155 aaPredicted RBP14.83□□□□□ -0.04
USP47-207ENST00000527733 TMEM26Q6ZUK4 368 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 POPDC3Q9HBV1 291 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 AP4S1Q9Y587 144 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 ZNF780BQ9Y6R6 833 aa14.83□□□□□ -0.04
USP47-207ENST00000527733 TCRBV5S1A1TA0A578 114 aa14.82□□□□□ -0.04
USP47-207ENST00000527733 AGRPO00253 132 aa14.82□□□□□ -0.04
USP47-207ENST00000527733 LIN7AO14910 233 aaPredicted RBP14.82□□□□□ -0.04
USP47-207ENST00000527733 ANXA6P08133 673 aa14.82□□□□□ -0.04
USP47-207ENST00000527733 PRPS2P11908 318 aa14.82□□□□□ -0.04
USP47-207ENST00000527733 CEBPBP17676 345 aa14.82□□□□□ -0.04
USP47-207ENST00000527733 CDH3P22223 829 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms