RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 AGAP5A6NIR3 686 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF99A8MXY4 864 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 EFCAB9A8MZ26 197 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZMPSTE24O75844 475 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MICAL2O94851 1124 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PAPSS2O95340 614 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MAP3K6O95382 1288 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 LCKP06239 509 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SAGP10523 405 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 DDX6P26196 483 aaKnown RBP eCLIP7.16□□□□□ -1.261e-7■■□□□ 13.6
CTNND1-216ENST00000527467 HTRA4P83105 476 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MERTKQ12866 999 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF460Q14592 562 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 LPCAT4Q643R3 524 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 USP45Q70EL2 814 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MOB1BQ7L9L4 216 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 GALNT7Q86SF2 657 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CREG2Q8IUH2 290 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 GJD3Q8N144 294 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 NKAPQ8N5F7 415 aaKnown RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 WDSUB1Q8N9V3 476 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 BADQ92934 168 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 UHRF1Q96T88 793 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF518BQ9C0D4 1074 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CDHR5Q9HBB8 845 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 IL1RAPQ9NPH3 570 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.16□□□□□ -1.263e-6■□□□□ 9.8
CTNND1-216ENST00000527467 RBM22Q9NW64 420 aaKnown RBP eCLIP7.16□□□□□ -1.263e-6■■■■□ 26.3
CTNND1-216ENST00000527467 SEC14L4Q9UDX3 406 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PLA2G4CQ9UP65 541 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TEX13DA0A0J9YY54 714 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 URADA6NGE7 173 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MEN1O00255 615 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 B3GALNT1O75752 331 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CYP3A4P08684 503 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 LTA4HP09960 611 aaKnown RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 UROSP10746 265 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 IDO1P14902 403 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SLC1A2P43004 574 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ABCG1P45844 678 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SMAD3P84022 425 aaKnown RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PTGR1Q14914 329 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SCGB2B2Q4G0G5 96 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MARC1Q5VT66 337 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 SLC39A5Q6ZMH5 540 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 KCTD8Q6ZWB6 473 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF720Q7Z2F6 126 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 GALNT5Q7Z7M9 940 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 HDAC7Q8WUI4 952 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 UQCC2Q9BRT2 126 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 IFT27Q9BW83 186 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 OR10A4Q9H209 315 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM27Q9HBJ8 222 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 BARHL2Q9NY43 387 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 ADGRE2Q9UHX3 823 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 MRTO4Q9UKD2 239 aaKnown RBP7.16□□□□□ -1.26
CTNND1-216ENST00000527467 TRHDEQ9UKU6 1024 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 IFT52Q9Y366 437 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 PCDHGB6Q9Y5F9 930 aa7.16□□□□□ -1.26
CTNND1-216ENST00000527467 A0A0A6YYK5 440 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 EME2A4GXA9 379 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 A8MVJ9 347 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TOR1BO14657 336 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 HDAC3O15379 428 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TREHO43280 583 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 CRTAPO75718 401 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 PROSCO94903 275 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TDP2O95551 362 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TSPAN15O95858 294 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 GLI1P08151 1106 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TFPIP10646 304 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 CHRNB1P11230 501 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 PRKCAP17252 672 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 MAGEB1P43366 347 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 RPS9P46781 194 aaKnown RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 VLDLRP98155 873 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 AARDQ4LEZ3 155 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 PAN2Q504Q3 1202 aaKnown RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ALKBH2Q6NS38 261 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM53Q6P2H8 277 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 C1orf186Q6ZWK4 172 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ADGRG6Q86SQ4 1221 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 HERC6Q8IVU3 1022 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF283Q8N7M2 679 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF565Q8N9K5 539 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF563Q8TA94 476 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 C14orf105Q9NVL8 296 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF878C9JN71 531 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 F5H0A9 414 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ACOX3O15254 700 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ITGA10O75578 1167 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 IFNA5P01569 189 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 HGFP14210 728 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 CD53P19397 219 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 IL32P24001 234 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 FMO4P31512 558 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 EPHB3P54753 998 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms