RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 POU6F1Q14863 301 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 SIX1Q15475 284 aaPredicted RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 KCTD19Q17RG1 926 aaPredicted RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 CCDC38Q502W7 563 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 FBXO38Q6PIJ6 1188 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 SERPINA9Q86WD7 417 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 NLGN4XQ8N0W4 816 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 TXLNBQ8N3L3 684 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 NLGN4YQ8NFZ3 816 aaPredicted RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 OR52K1Q8NGK4 314 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ULK4Q96C45 1275 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 DCUN1D1Q96GG9 259 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ZDHHC12Q96GR4 267 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 SLC41A2Q96JW4 573 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 C12orf66Q96MD2 445 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 PPM1MQ96MI6 270 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 PPP1R2P1Q96PQ5 205 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 OR6C1Q96RD1 312 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 COPS8Q99627 209 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 MAP3K3Q99759 626 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ZPBPQ9BS86 351 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ZDHHC3Q9NYG2 299 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 SLC24A2Q9UI40 661 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ACSL5Q9ULC5 683 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 PRSS21Q9Y6M0 314 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 TERTO14746 1132 aaKnown RBP10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 RASSF9O75901 435 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ZIC2O95409 532 aaPredicted RBP10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ZSCAN5DPP0CG00 497 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 FGF5P12034 268 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 FOLR1P15328 257 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ACRV1P26436 265 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 PDHA2P29803 388 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 STIP1P31948 543 aaKnown RBP10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 HADHAP40939 763 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ARCN1P48444 511 aaKnown RBP10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 SNX1Q13596 522 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 DBN1Q16643 649 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 P3H1Q32P28 736 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 GPR33Q49SQ1 333 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ZRANB3Q5FWF4 1079 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 TAS2R42Q7RTR8 314 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ZNF605Q86T29 641 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 CLDN19Q8N6F1 224 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 ZSCAN1Q8NBB4 408 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 PHC3Q8NDX5 983 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 STYXQ8WUJ0 223 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 SLC45A3Q96JT2 553 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 OR52A5Q9H2C5 316 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 KIR3DX1Q9H7L2 352 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 COG4Q9H9E3 785 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 SLC2A6Q9UGQ3 507 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 MRPS18BQ9Y676 258 aaKnown RBP10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 SPTBP11277 2137 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 PIKFYVEQ9Y2I7 2098 aa10.18□□□□□ -0.78
PRPF40B-204ENST00000527253 C17orf113A0A1B0GUU1 675 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 CCDC162PA2VCL2 907 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 KLHL33A6NCF5 533 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 OR6C74A6NCV1 312 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 OR5K3A6NET4 321 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 GOLGA6L3A6NEY3 463 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 B8ZZF3 427 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 PYCARD-AS1I3L0S3 204 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 PSMD3O43242 534 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 SPAG6O75602 509 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 KIAA0754O94854 1291 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 SUN1O94901 812 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 SLC35G4P0C7Q5 338 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 EBLN1P0CF75 366 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 FOXN2P32314 431 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 STAT5AP42229 794 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 PREPP48147 710 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 KPNA2P52292 529 aaKnown RBP10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 CACNG1Q06432 222 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 ABHD18Q0P651 414 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 MAP7Q14244 749 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 IL11RAQ14626 422 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 ATP1A1-AS1Q5TC04 95 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 SEL1L2Q5TEA6 688 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 GALNT6Q8NCL4 622 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 OR13J1Q8NGT2 312 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 HM13Q8TCT9 377 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 HEXDCQ8WVB3 486 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 ZFPM2Q8WW38 1151 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 UBXN4Q92575 508 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 ZNF778Q96MU6 729 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 CCM2Q9BSQ5 444 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 ULBP3Q9BZM4 244 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 TSGA10Q9BZW7 698 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 AKIRIN1Q9H9L7 192 aaPredicted RBP10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 GPN2Q9H9Y4 310 aaPredicted RBP10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 LZTFL1Q9NQ48 299 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 HRASLS2Q9NWW9 162 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 ZNF148Q9UQR1 794 aa10.17□□□□□ -0.78
PRPF40B-204ENST00000527253 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
PRPF40B-204ENST00000527253 BTN3A3O00478 584 aa10.16□□□□□ -0.78
PRPF40B-204ENST00000527253 ARHGAP6O43182 974 aa10.16□□□□□ -0.78
PRPF40B-204ENST00000527253 KRT86O43790 486 aa10.16□□□□□ -0.78
PRPF40B-204ENST00000527253 OR1I1O60431 355 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms