RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ENTPD4Q9Y227 616 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 SNX24Q9Y343 169 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 ARL5AQ9Y689 179 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 FADS2P1A8MWK0 482 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 NEMP1O14524 444 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 ZW10O43264 779 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 B4GAT1O43505 415 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 SEC31AO94979 1220 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 PDGFAP04085 211 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 ELFN1P0C7U0 828 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 CSTF2P33240 577 aaKnown RBP eCLIP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 LEPRP48357 1165 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 ZNF140P52738 457 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 PMS2P54278 862 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 DRG2P55039 364 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 CDK16Q00536 496 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 SLC7A5Q01650 507 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 DPTQ07507 201 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 MRPL49Q13405 166 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 MTM1Q13496 603 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 IRF4Q15306 451 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 PPP1R7Q15435 360 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 TAF1AQ15573 450 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 HENMT1Q5T8I9 393 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 ATP1A1-AS1Q5TC04 95 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 DENND2CQ68D51 928 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 PNCKQ6P2M8 343 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 ZDHHC24Q6UX98 284 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 LINC00523Q86TU6 105 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 IGDCC3Q8IVU1 814 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 PPIL6Q8IXY8 311 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 NDUFAF2Q8N183 169 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 BMPERQ8N8U9 685 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 OR4D9Q8NGE8 314 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 OR13C4Q8NGS5 318 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 BLOC1S5Q8TDH9 187 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 TSACCQ96A04 125 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 C5orf34Q96MH7 638 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 SERPINB12Q96P63 405 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 RANBP9Q96S59 729 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 TRIM56Q9BRZ2 755 aaKnown RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 LGR4Q9BXB1 951 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 BPIFA1Q9NP55 256 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 IL26Q9NPH9 171 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 CHRAC1Q9NRG0 131 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 NFKBIL1Q9UBC1 381 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 CD84Q9UIB8 345 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 TLK1Q9UKI8 766 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 POLHQ9Y253 713 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 SLC5A6Q9Y289 635 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 TMEM184BQ9Y519 407 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-204ENST00000526430 DGKBQ9Y6T7 804 aa10.75□□□□□ -0.69
NEDD8-204ENST00000526430 CTAGE15A4D2H0 777 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 AGAP14A8MT82 685 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 EFCAB8A8MWE9 144 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 GOLGA8MH3BSY2 632 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CCL22O00626 93 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 BANF1O75531 89 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CTAGE8P0CG41 777 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 MLNP12872 115 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 HTR1BP28222 390 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 STAT5AP42229 794 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 NPY2RP49146 381 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ITGA8P53708 1063 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 SRP54P61011 504 aaKnown RBP10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CRADDP78560 199 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ACVR1Q04771 509 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CDH17Q12864 832 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 SQSTM1Q13501 440 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 PEX6Q13608 980 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 INPP5AQ14642 412 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 NFATC4Q14934 902 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 LRRC14Q15048 493 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ACOX1Q15067 660 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 IZUMO3Q5VZ72 239 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ANKS6Q68DC2 871 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CCDC70Q6NSX1 233 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 C16orf46Q6P387 395 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ZNF765Q7L2R6 523 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 MAATS1Q7Z4T9 603 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CTAGE6Q86UF2 777 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 C17orf82Q86X59 251 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ZGRF1Q86YA3 2104 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 APLFQ8IW19 511 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-204ENST00000526430 CTAGE4Q8IX94 777 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 NRSN1Q8IZ57 195 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 OR4K2Q8NGD2 314 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 OR13J1Q8NGT2 312 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 DTX3LQ8TDB6 740 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
NEDD8-204ENST00000526430 LRRC45Q96CN5 670 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 DPYSL5Q9BPU6 564 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 C19orf43Q9BQ61 176 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ZPBPQ9BS86 351 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 RIOK2Q9BVS4 552 aaKnown RBP10.74□□□□□ -0.69
NEDD8-204ENST00000526430 TRIM31Q9BZY9 425 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 TRABDQ9H4I3 376 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 TREX1Q9NSU2 369 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms