RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SLC1A5Q15758 541 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 LONRF2Q1L5Z9 754 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 LRRC38Q5VT99 294 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 PRAMEF17Q5VTA0 474 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 IZUMO3Q5VZ72 239 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 LCN10Q6JVE6 187 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 ZNF517Q6ZMY9 492 aaPredicted RBP23.35■■□□□ 1.33
USP47-205ENST00000525257 ENDOVQ8N8Q3 282 aaKnown RBP23.35■■□□□ 1.33
USP47-205ENST00000525257 SPDYE1Q8NFV5 336 aaPredicted RBP23.35■■□□□ 1.33
USP47-205ENST00000525257 OR8K5Q8NH50 307 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 SSC4DQ8WTU2 575 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 TLR10Q9BXR5 811 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 DDX56Q9NY93 547 aaKnown RBP23.35■■□□□ 1.33
USP47-205ENST00000525257 LUZP4Q9P127 313 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 SNX7Q9UNH6 387 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 GOLGA6L19H0YKK7 550 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 AKR1B10O60218 316 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 SEMA7AO75326 666 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 EPOP01588 193 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 KLK3P07288 261 aaPredicted RBP23.34■■□□□ 1.33
USP47-205ENST00000525257 LPOP22079 712 aaPredicted RBP23.34■■□□□ 1.33
USP47-205ENST00000525257 NR2C2P49116 596 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 ESPL1Q14674 2120 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 PRR30Q53SZ7 412 aaPredicted RBP23.34■■□□□ 1.33
USP47-205ENST00000525257 FAM69BQ5VUD6 431 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 PAPD7Q5XG87 772 aaKnown RBP23.34■■□□□ 1.33
USP47-205ENST00000525257 KAZNQ674X7 775 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 BZW1Q7L1Q6 419 aaKnown RBP23.34■■□□□ 1.33
USP47-205ENST00000525257 RHOT1Q8IXI2 618 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 ADAMTS17Q8TE56 1095 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 KIR3DX1Q9H7L2 352 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 SMOXQ9NWM0 555 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 ZNF451Q9Y4E5 1061 aa23.34■■□□□ 1.33
USP47-205ENST00000525257 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.34■■□□□ 1.33
USP47-205ENST00000525257 MGAT4DA6NG13 374 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 CST8O60676 142 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 SLC35G4P0C7Q5 338 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 RNF224P0DH78 156 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 POLR2CP19387 275 aaPredicted RBP23.33■■□□□ 1.33
USP47-205ENST00000525257 HLA-DPA1P20036 260 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 CDKN2BP42772 138 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 GSDMDP57764 484 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 ABRQ12979 859 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 PLEKHS1Q5SXH7 462 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 ZC3H18Q86VM9 953 aaKnown RBP23.33■■□□□ 1.33
USP47-205ENST00000525257 ZNF567Q8N184 647 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 MFRPQ9BY79 579 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 LATS2Q9NRM7 1088 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 SPTLC3Q9NUV7 552 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 ACSL5Q9ULC5 683 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 BTRCQ9Y297 605 aa23.33■■□□□ 1.33
USP47-205ENST00000525257 SPTBP11277 2137 aa23.33■■□□□ 1.32
USP47-205ENST00000525257 CENPEQ02224 2701 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 SSU72P8A0A1W2PR75 194 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 MEN1O00255 615 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 STX7O15400 261 aaKnown RBP23.32■■□□□ 1.32
USP47-205ENST00000525257 TMEM63AO94886 807 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 LCA5LO95447 670 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 PRAMEF1O95521 474 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 TFDP2Q14188 446 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 INPP5JQ15735 1006 aaPredicted RBP23.32■■□□□ 1.32
USP47-205ENST00000525257 PID1Q7Z2X4 250 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 RHOT2Q8IXI1 618 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 DSELQ8IZU8 1212 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 OR2L2Q8NH16 312 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 ZNF398Q8TD17 642 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 ZFPM2Q8WW38 1151 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 CPT1BQ92523 772 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 CLIP3Q96DZ5 547 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 RMDN2Q96LZ7 410 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 LRFN5Q96NI6 719 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 FCRL5Q96RD9 977 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 FANCEQ9HB96 536 aa23.32■■□□□ 1.32
USP47-205ENST00000525257 SLC9B1P1A6NJY1 282 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 CEACAM4O75871 244 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 POLBP06746 335 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 RAB40ALP0C0E4 278 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 CDH3P22223 829 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 PRKAA1Q13131 559 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 KRT33BQ14525 404 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 GSE1Q14687 1217 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 JMJD6Q6NYC1 403 aaPredicted RBP23.31■■□□□ 1.32
USP47-205ENST00000525257 DAAM2Q86T65 1068 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 CARFQ8N187 725 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 FDCSPQ8NFU4 85 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 OR4E2Q8NGC2 313 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 OR8K1Q8NGG5 319 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 HAUS1Q96CS2 278 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 DNAJC7Q99615 494 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 NUDT9Q9BW91 350 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 FSD1LQ9BXM9 530 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 MAP10Q9P2G4 905 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 POMT2Q9UKY4 750 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 TCFL5Q9UL49 500 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 ARL5AQ9Y689 179 aa23.31■■□□□ 1.32
USP47-205ENST00000525257 A1L4Q6 167 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 A6NL46 340 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 ZNF185O15231 689 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 SPOPO43791 374 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 DPM1O60762 260 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms