RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ENTPD1P49961 510 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CLCN3P51790 818 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 LOXL3P58215 753 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 UBE2IP63279 158 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 TPM4P67936 248 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DUSP2Q05923 314 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CHRNA6Q15825 494 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 NKPD1Q17RQ9 610 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 KLHL40Q2TBA0 621 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 COL28A1Q2UY09 1125 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 FBXO43Q4G163 708 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 AASDHQ4L235 1098 aaPredicted RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 ATP13A5Q4VNC0 1218 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 MPPE1Q53F39 396 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
CD44-213ENST00000525209 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TMEM198Q66K66 360 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 NCR3LG1Q68D85 454 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TXNRD3NBQ6F5E7 133 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TEPPQ6URK8 271 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DLEU7Q6UYE1 221 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CLEC14AQ86T13 490 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SERINC5Q86VE9 423 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 GRAMD2AQ8IUY3 354 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TMEFF1Q8IYR6 380 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SYCE1Q8N0S2 351 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CENPLQ8N0S6 344 aaPredicted RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 PDPRQ8NCN5 879 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 FAM71CQ8NEG0 241 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 OIT3Q8WWZ8 545 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 RLN3Q8WXF3 142 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 NSMAFQ92636 917 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 RAD54LQ92698 747 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 ESAMQ96AP7 390 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 AP2M1Q96CW1 435 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 PABPC5Q96DU9 382 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 MYRFLQ96LU7 910 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TMEM68Q96MH6 324 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TBC1D32Q96NH3 1257 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SEPT5Q99719 369 aaPredicted RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 SCNM1Q9BWG6 230 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 KATNBL1Q9H079 304 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 VCX3BQ9H321 246 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TMEM245Q9H330 911 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 NSUN3Q9H649 340 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 EPB41L5Q9HCM4 733 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SLCO1C1Q9NYB5 712 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CNOT2Q9NZN8 540 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 RBPJLQ9UBG7 517 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CD300AQ9UGN4 299 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 SLC24A2Q9UI40 661 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 PLA2G4CQ9UP65 541 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 MGAT4BQ9UQ53 548 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 GAB2Q9UQC2 676 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 ENTPD4Q9Y227 616 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
CD44-213ENST00000525209 BCORL1Q5H9F3 1711 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 OR6C65A6NJZ3 312 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 C3orf70A6NLC5 250 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 OR52A4PA6NMU1 304 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 CXorf49A8MYA2 514 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 RRP8O43159 456 aaKnown RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 KLK8O60259 260 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 HBP1O60381 514 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SNNO75324 88 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 KDM4BO94953 1096 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ZWINTO95229 277 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 IL18BPO95998 194 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ESR1P03372 595 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 OPN1LWP04000 364 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ASNSP08243 561 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 PRKAR1AP10644 381 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 BMP3P12645 472 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 IL7RP16871 459 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 GJA1P17302 382 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 CYP11B2P19099 503 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ATP6V1C1P21283 382 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 PRPH2P23942 346 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ANXA13P27216 316 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ACADLP28330 430 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 EPHA3P29320 983 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 TRHRP34981 398 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 KIR2DL1P43626 348 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 KIR2DL2P43627 348 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 CD97P48960 835 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 GMPSP49915 693 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 BLKP51451 505 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 DGKQP52824 942 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 RPP38P78345 283 aaKnown RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 PPP1R8Q12972 351 aaKnown RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 XRCC4Q13426 336 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 BFSP2Q13515 415 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 TP53BP2Q13625 1128 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 GPR162Q16538 588 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SKIDA1Q1XH10 827 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms