RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 E2F3O00716 465 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 AURKAO14965 403 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A9O60656 530 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 POLBP06746 335 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 MMP2P08253 660 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 GPR89BP0CG08 455 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CBSLP0DN79 551 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 MTHFD1P11586 935 aaKnown RBP11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A6P19224 532 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 HLA-DPA1P20036 260 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A1P22309 533 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A4P22310 534 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CES1P23141 567 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CBSP35520 551 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CTSCP53634 463 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 KCNK10P57789 538 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 GALNT2Q10471 571 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 PRKAA1Q13131 559 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CYP2A13Q16696 494 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 DEFB110Q30KQ9 67 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 ATP13A4Q4VNC1 1196 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 BOLA3Q53S33 107 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CRB2Q5IJ48 1285 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 NCBP2-AS2Q69YL0 99 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 WASH2PQ6VEQ5 465 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 Q6ZS92 163 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 B4GALNT4Q76KP1 1039 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 NT5DC3Q86UY8 548 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 NXPE1Q8N323 547 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 OR8K5Q8NH50 307 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 MAML1Q92585 1016 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
SDCBP-211ENST00000523441 WDR77Q9BQA1 342 aaPredicted RBP11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A7Q9HAW7 530 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A10Q9HAW8 530 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 UGT1A8Q9HAW9 530 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 HAUS2Q9NVX0 235 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 P4HTMQ9NXG6 502 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CDYLQ9Y232 598 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 DCHS2Q6V1P9 2916 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 AKAP9Q99996 3911 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 ZFHX3Q15911 3703 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 E7EQ34 232 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 BUD23O43709 281 aaKnown RBP11.3□□□□□ -0.6
SDCBP-211ENST00000523441 MT-CYBP00156 380 aaPredicted RBP11.3□□□□□ -0.6
SDCBP-211ENST00000523441 CCDC172P0C7W6 258 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 ATP1A3P13637 1013 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 COX6B1P14854 86 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 ST6GAL1P15907 406 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 AKT1P31749 480 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 PCK1P35558 622 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 ZBTB17Q13105 803 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 NOMO1Q15155 1222 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 PPP2R5EQ16537 467 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 FNBP1LQ5T0N5 605 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 ALG1LQ6GMV1 187 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 FAM151BQ6UXP7 276 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 RASGEF1AQ8N9B8 481 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 IFT80Q9P2H3 777 aaPredicted RBP11.3□□□□□ -0.6
SDCBP-211ENST00000523441 NDOR1Q9UHB4 597 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 SERTAD3Q9UJW9 196 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 SPO11Q9Y5K1 396 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 SCINQ9Y6U3 715 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 POLEQ07864 2286 aa11.3□□□□□ -0.6
SDCBP-211ENST00000523441 TRGV8A0A0C4DH27 118 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 A0A1B0GUH1 482 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 CCDC78A2IDD5 438 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 MAP3K7O43318 606 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
SDCBP-211ENST00000523441 IPO13O94829 963 aaKnown RBP11.29□□□□□ -0.6
SDCBP-211ENST00000523441 EDN3P14138 238 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
SDCBP-211ENST00000523441 CCNCP24863 283 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 HTR1EP28566 365 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 DCDC1P59894 354 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 UBE2HP62256 183 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 GBE1Q04446 702 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 SSPNQ14714 243 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 ASIC2Q16515 512 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 ZNF789Q5FWF6 425 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 CDKAL1Q5VV42 579 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 IGFL3Q6UXB1 125 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 LINC00696Q6ZRV3 163 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 IRF2BP2Q7Z5L9 587 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 TMC3Q7Z5M5 1100 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 CPNE8Q86YQ8 564 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 RAVER1Q8IY67 606 aaKnown RBP11.29□□□□□ -0.6
SDCBP-211ENST00000523441 FAR1Q8WVX9 515 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 HAUS4Q9H6D7 363 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 ATP13A2Q9NQ11 1180 aa11.29□□□□□ -0.6
SDCBP-211ENST00000523441 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms