RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 NSG1P42857 185 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 MAGEA3P43357 314 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 FASTKD1Q53R41 847 aaKnown RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 NLRP9Q7RTR0 991 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 KRT222Q8N1A0 295 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 GRK7Q8WTQ7 553 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 HEXDCQ8WVB3 486 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 FGF11Q92914 225 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 PEX13Q92968 403 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 RNF31Q96EP0 1072 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 PWWP2AQ96N64 755 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 UCK1Q9HA47 277 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 MRM3Q9HC36 420 aaKnown RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 OCIAD1Q9NX40 245 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 FOXJ2Q9P0K8 574 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 ASIC3Q9UHC3 531 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 PCYOX1Q9UHG3 505 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 RALYQ9UKM9 306 aaKnown RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 ANKRD11Q6UB99 2663 aaPredicted RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 MN1Q10571 1320 aaPredicted RBP17.45■□□□□ 0.38
CLK4-211ENST00000522556 CD3EAPO15446 510 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 KIF1CO43896 1103 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 ITGA2BP08514 1039 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 SLC35G4P0C7Q5 338 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 JMJD7P0C870 316 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 FGF3P11487 239 aaPredicted RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 RBMS1P29558 406 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 EIF2S3P41091 472 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 ARCN1P48444 511 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 MAPK10P53779 464 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 CSE1LP55060 971 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 LAMB3Q13751 1172 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 BOP1Q14137 746 aaKnown RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 CASC4Q6P4E1 433 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 WDR74Q6RFH5 385 aaPredicted RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 IGF2-ASQ6U949 168 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 MCUQ8NE86 351 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 SLCO2A1Q92959 643 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLK4-211ENST00000522556 ZNF669Q96BR6 464 aaPredicted RBP17.44■□□□□ 0.38
CLK4-211ENST00000522556 TGM7Q96PF1 710 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 PDP2Q9P2J9 529 aa17.44■□□□□ 0.38
CLK4-211ENST00000522556 SDK2Q58EX2 2172 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 C17orf113A0A1B0GUU1 675 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 C9orf172C9J069 976 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 DNALI1O14645 258 aaPredicted RBP17.43■□□□□ 0.38
CLK4-211ENST00000522556 TTI1O43156 1089 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 PRAMEF10O60809 474 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 AP2A2O94973 939 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 SLC5A2P31639 672 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 CAPZBP47756 277 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 EIF3IQ13347 325 aaKnown RBP17.43■□□□□ 0.38
CLK4-211ENST00000522556 CLPPQ16740 277 aaPredicted RBP17.43■□□□□ 0.38
CLK4-211ENST00000522556 MSS51Q4VC12 460 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 ZNF789Q5FWF6 425 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 IZUMO3Q5VZ72 239 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 SYT10Q6XYQ8 523 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 ARHGAP22Q7Z5H3 698 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 CLEC14AQ86T13 490 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 JAMLQ86YT9 394 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 VRK3Q8IV63 474 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 PPIL6Q8IXY8 311 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 UNC5BQ8IZJ1 945 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 AVL9Q8NBF6 648 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 PHC3Q8NDX5 983 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 ELMO1Q92556 727 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 USP7Q93009 1102 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 SGSM3Q96HU1 749 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 SIGLEC10Q96LC7 697 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 ZNF578Q96N58 590 aaPredicted RBP17.43■□□□□ 0.38
CLK4-211ENST00000522556 CMKLR1Q99788 373 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 THSD1Q9NS62 852 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 SLC24A2Q9UI40 661 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 ACSL5Q9ULC5 683 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 ZFHX4Q86UP3 3567 aa17.43■□□□□ 0.38
CLK4-211ENST00000522556 A0A087WV48 116 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 BHMG1C9JSJ3 638 aaPredicted RBP17.42■□□□□ 0.38
CLK4-211ENST00000522556 TMX2-CTNND1H3BSU7 103 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 ZW10O43264 779 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 C9P02748 559 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 MLNP12872 115 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 AMD1P17707 334 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 CCR7P32248 378 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 PCBP4P57723 403 aaKnown RBP17.42■□□□□ 0.38
CLK4-211ENST00000522556 ERVPABLB-1P60509 514 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 SRSF6Q13247 344 aaKnown RBP17.42■□□□□ 0.38
CLK4-211ENST00000522556 PLCL1Q15111 1095 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 COL28A1Q2UY09 1125 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 ANKRD20A4Q4UJ75 823 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 CTSL3PQ5NE16 218 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 KIAA0930Q6ICG6 404 aaPredicted RBP17.42■□□□□ 0.38
CLK4-211ENST00000522556 FAM92BQ6ZTR7 304 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 SPACA3Q8IXA5 215 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 LSMEM2Q8N112 164 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 OTUD6BQ8N6M0 293 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 BMPERQ8N8U9 685 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 PPM1MQ96MI6 270 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 WDR83Q9BRX9 315 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms