RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ACSL5Q9ULC5 683 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 MRPS18BQ9Y676 258 aaKnown RBP20.22■□□□□ 0.83
SDCBP-209ENST00000522243 RPS6KL1Q9Y6S9 549 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 SPAG6O75602 509 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 ZNF189O75820 626 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 SLC35G4P0C7Q5 338 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 ATP1B2P14415 290 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 NELFEP18615 380 aaKnown RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 F8A1P23610 371 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 CDC25BP30305 580 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 STAT5AP42229 794 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 ARCN1P48444 511 aaKnown RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 PRLHRP49683 370 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 IL11RAQ14626 422 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 POU6F1Q14863 301 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 C16orf46Q6P387 395 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 C6orf15Q6UXA7 325 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 TAS2R42Q7RTR8 314 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 SIDT2Q8NBJ9 832 aaKnown RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 ATG4AQ8WYN0 398 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 STARD8Q92502 1023 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 HES6Q96HZ4 224 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 EFHD1Q9BUP0 239 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 LRRC40Q9H9A6 602 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 STARD5Q9NSY2 213 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 HRASLS2Q9NWW9 162 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 SLC24A2Q9UI40 661 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 LNPEPQ9UIQ6 1025 aa20.21■□□□□ 0.83
SDCBP-209ENST00000522243 HEMK1Q9Y5R4 338 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-209ENST00000522243 OR5K3A6NET4 321 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 CFAP99D6REC4 459 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 FGF5P12034 268 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 FOLR1P15328 257 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 CDC20Q12834 499 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 MAP7Q14244 749 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 DNTTIP2Q5QJE6 756 aaKnown RBP20.2■□□□□ 0.82
SDCBP-209ENST00000522243 ATP1A1-AS1Q5TC04 95 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 CAPRIN2Q6IMN6 1127 aaKnown RBP20.2■□□□□ 0.82
SDCBP-209ENST00000522243 SERPINA9Q86WD7 417 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 OOSP2Q86WS3 158 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 UBXN4Q92575 508 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 STAMBPL1Q96FJ0 436 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 NLE1Q9NVX2 485 aaPredicted RBP20.2■□□□□ 0.82
SDCBP-209ENST00000522243 GEMIN8Q9NWZ8 242 aaKnown RBP20.2■□□□□ 0.82
SDCBP-209ENST00000522243 ZDHHC3Q9NYG2 299 aa20.2■□□□□ 0.82
SDCBP-209ENST00000522243 UBA6A0AVT1 1052 aaPredicted RBP20.19■□□□□ 0.82
SDCBP-209ENST00000522243 OR6C74A6NCV1 312 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 TIAF1O95411 115 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 EBLN1P0CF75 366 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 SFTPCP11686 197 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 OAS2P29728 719 aaKnown RBP20.19■□□□□ 0.82
SDCBP-209ENST00000522243 DLSTP36957 453 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 CCR10P46092 362 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 ARL4DP49703 201 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 POLE2P56282 527 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 KRT33BQ14525 404 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 P3H1Q32P28 736 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 GPR33Q49SQ1 333 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 FBXO38Q6PIJ6 1188 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 PPP1R3BQ86XI6 285 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 HM13Q8TCT9 377 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 CDKN2AIPNLQ96HQ2 116 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 SLC41A2Q96JW4 573 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 PPM1MQ96MI6 270 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 KIR3DX1Q9H7L2 352 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 COG4Q9H9E3 785 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 SEMA5BQ9P283 1151 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 CROTQ9UKG9 612 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 RARRES3Q9UL19 164 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 GUCA1BQ9UMX6 200 aa20.19■□□□□ 0.82
SDCBP-209ENST00000522243 KLHL33A6NCF5 533 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 PSMD3O43242 534 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 AP2A1O95782 977 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 TCN2P20062 427 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 ACRV1P26436 265 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 TUBB3Q13509 450 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 DEFB109BQ30KR1 87 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 SEL1L2Q5TEA6 688 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 ARMC6Q6NXE6 501 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 OR4E2Q8NGC2 313 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 OR52K1Q8NGK4 314 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 STYXQ8WUJ0 223 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 HEXDCQ8WVB3 486 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 CATSPER2Q96P56 530 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 FERD3LQ96RJ6 166 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 C19orf43Q9BQ61 176 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 SLC25A18Q9H1K4 315 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 PDE7BQ9NP56 450 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 COLEC10Q9Y6Z7 277 aa20.18■□□□□ 0.82
SDCBP-209ENST00000522243 TRBV5-4A0A0C4DH59 114 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 TLCD2A6NGC4 264 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 H7C0S8 307 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 KATNA1O75449 491 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 POLR2CP19387 275 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-209ENST00000522243 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.17■□□□□ 0.82
SDCBP-209ENST00000522243 CCDC38Q502W7 563 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 PRUNE1Q86TP1 453 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 PIANPQ8IYJ0 282 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 RNF10Q8N5U6 811 aaKnown RBP20.17■□□□□ 0.82
SDCBP-209ENST00000522243 CLDN19Q8N6F1 224 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms