RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 U2AF2P26368 475 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CTSCP53634 463 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CLDN20P56880 219 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 RPL36AP83881 106 aaKnown RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 NUCB1Q02818 461 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 RELQ04864 619 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 GTF2H2Q13888 395 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 IRF3Q14653 427 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KRTCAP3Q53RY4 240 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 RILPL1Q5EBL4 403 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 IRAK1BP1Q5VVH5 260 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 GTF2H2CQ6P1K8 395 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CFAP161Q6P656 301 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 C18orf65Q6ZTR6 163 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 SZRD1Q7Z422 152 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM219Q86XT9 240 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 MAP7D3Q8IWC1 876 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 PM20D2Q8IYS1 436 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 PDCL2Q8N4E4 241 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 RFLNBQ8N5W9 214 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF441Q8N8Z8 693 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 ACVR1CQ8NER5 493 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIF18AQ8NI77 898 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIAA1524Q8TCG1 905 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 UTP15Q8TED0 518 aaKnown RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 SLC20A1Q8WUM9 679 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 SAT2Q96F10 170 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 FEM1CQ96JP0 617 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 SEMA3CQ99985 751 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 NEURL2Q9BR09 285 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 SYT17Q9BSW7 474 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CDK19Q9BWU1 502 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 RETREG1Q9H6L5 497 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 EVA1AQ9H8M9 152 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KLHL1Q9NR64 748 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF446Q9NWS9 450 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 POLKQ9UBT6 870 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 TBC1D29Q9UFV1 150 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 SEC63Q9UGP8 760 aaKnown RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KCNS2Q9ULS6 477 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 PADI3Q9ULW8 664 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 PIK3R4Q99570 1358 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CD163L1Q9NR16 1453 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 ADGRB2O60241 1585 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 GLI2P10070 1586 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIF16BQ96L93 1317 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 YTHDC2Q9H6S0 1430 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 AGLP35573 1532 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 DLC1Q96QB1 1528 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TULP4Q9NRJ4 1543 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ASPDHA6ND91 283 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM8BA6NDV4 472 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 B4DLN1 442 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ANKRD66B4E2M5 251 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 PRSS44E7EML9 344 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 K7ENM7 598 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNHIT1O43257 154 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 WDR1O75083 606 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 GFPT2O94808 682 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 REC8O95072 547 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 GH2P01242 217 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 FAM106CPP0CH98 169 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 HLA-DOBP13765 273 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 MYOD1P15172 320 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 POLR2CP19387 275 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 KCNA5P22460 613 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 DGKAP23743 735 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 MRPL12P52815 198 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 MFAP4P55083 255 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 GSCP56915 257 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 KCNC3Q14003 757 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZDHHC20Q5W0Z9 365 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ASB18Q6ZVZ8 466 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 PLEKHM3Q6ZWE6 761 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ODF3L1Q8IXM7 274 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 DCP1BQ8IZD4 617 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TAGAPQ8N103 731 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 RASGEF1CQ8N431 466 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 SLC5A8Q8N695 610 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 POC1AQ8NBT0 407 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 HMGCLL1Q8TB92 370 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 PPP4R1Q8TF05 950 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 SLC38A5Q8WUX1 472 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM255BQ8WV15 326 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 SECTM1Q8WVN6 248 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF622Q969S3 477 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 LRRC59Q96AG4 307 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TTC14Q96N46 770 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAD1Q99259 594 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TEX12Q9BXU0 123 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 HRH4Q9H3N8 390 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF556Q9HAH1 456 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 UPF2Q9HAU5 1272 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 ADD3Q9UEY8 706 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM5Q9Y2B1 443 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 DLGAP4Q9Y2H0 992 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 A0A1W2PP64 1363 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 PTPRMP28827 1452 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms