RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DVL1P1P54792 670 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 BECN1Q14457 450 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 IGSF11Q5DX21 431 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 FAM76BQ5HYJ3 339 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 ADALQ6DHV7 355 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 TMCO3Q6UWJ1 677 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 KRT74Q7RTS7 529 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 PIWIL4Q7Z3Z4 852 aaKnown RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 ADIPOR2Q86V24 386 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 LONP2Q86WA8 852 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 PTOV1Q86YD1 416 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 KBTBD3Q8NAB2 608 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 RBM15BQ8NDT2 890 aaKnown RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 TAS1R2Q8TE23 839 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 OXNAD1Q96HP4 312 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 HES6Q96HZ4 224 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 C17orf77Q96MU5 243 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 OR6C1Q96RD1 312 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 SLX1AQ9BQ83 275 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 MMP28Q9H239 520 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 TRPC7Q9HCX4 862 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 ANKEF1Q9NU02 776 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 ZFP57Q9NU63 452 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 FAM118AQ9NWS6 357 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 NKIRAS2Q9NYR9 191 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 GDE1Q9NZC3 331 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 PPIEQ9UNP9 301 aaKnown RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 RABGAP1Q9Y3P9 1069 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 RPS6KL1Q9Y6S9 549 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 TEX13DA0A0J9YY54 714 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 A6NL46 340 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 P2RY10O00398 339 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 ADAM20O43506 726 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 XPNPEP2O43895 674 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 PRKNO60260 465 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 GCNT3O95395 438 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 LIPFP07098 398 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 AKR1B1P15121 316 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 GJA1P17302 382 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 IL11P20809 199 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 MARK3P27448 753 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 CDK3Q00526 305 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 NDUFAF5Q5TEU4 345 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 GPR139Q6DWJ6 353 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 KLC3Q6P597 504 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 C19orf48Q6RUI8 117 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 LINGO4Q6UY18 593 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 CEP57Q86XR8 500 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 GPALPP1Q8IXQ4 340 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 L3MBTL4Q8NA19 623 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 AVL9Q8NBF6 648 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 SLC24A4Q8NFF2 622 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 OR10S1Q8NGN2 331 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 MOSPD2Q8NHP6 518 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 SNRNP27Q8WVK2 155 aaKnown RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 LPGAT1Q92604 370 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 SEMA4DQ92854 862 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 ZNF583Q96ND8 569 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 INPP4AQ96PE3 977 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 GCNAQ96QF7 691 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 CDRT15Q96T59 188 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 SLA2Q9H6Q3 261 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 ZBTB20Q9HC78 741 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 SLC35C2Q9NQQ7 365 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 MIOSQ9NXC5 875 aa3.48□□□□□ -1.85
VPS13B-207ENST00000518569 CPSF2Q9P2I0 782 aaKnown RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 CRNNQ9UBG3 495 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-207ENST00000518569 TCRBV21S2A2A0A5A6 115 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 MED19A0JLT2 244 aaPredicted RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 BICDL2A1A5D9 508 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 ELOVL7A1L3X0 281 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 HEPACAM2A8MVW5 462 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 PRR32B1ATL7 298 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 ZNF432O94892 652 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 H1F0P07305 194 aaKnown RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 ADRB2P07550 413 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 KRT19P08727 400 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 VDRP11473 427 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 LIG4P49917 911 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 CALD1Q05682 793 aaKnown RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 MFAP5Q13361 173 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 RBBP5Q15291 538 aaKnown RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 C9orf50Q5SZB4 431 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 ALS2CLQ60I27 953 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 NAA16Q6N069 864 aaPredicted RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 CUZD1Q86UP6 607 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 NR2C2APQ86WQ0 139 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 CCDC89Q8N998 374 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 POMGNT2Q8NAT1 580 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 PPFIBP2Q8ND30 876 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 TSPAN14Q8NG11 270 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 WDR20Q8TBZ3 569 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 MTERF3Q96E29 417 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 ST6GAL2Q96JF0 529 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 PRMT6Q96LA8 375 aaPredicted RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 FAM81BQ96LP2 452 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 ZNF582Q96NG8 517 aaPredicted RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 NEUROD6Q96NK8 337 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 UHRF2Q96PU4 802 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms