RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 CD40LGP29965 261 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 DCTP40126 519 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 MASP1P48740 699 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 PRR23BQ6ZRT6 265 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 UTS2BQ765I0 119 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 ARRDC2Q8TBH0 407 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 RHBDF1Q96CC6 855 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 ZNF300Q96RE9 604 aaPredicted RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 THUMPD3Q9BV44 507 aaKnown RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 NUSAP1Q9BXS6 441 aaKnown RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 UGT2B28Q9BY64 529 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 MROH8Q9H579 483 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 EPS8L2Q9H6S3 715 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 RMND5AQ9H871 391 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 CATSPERZQ9NTU4 200 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 ATP11BQ9Y2G3 1177 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 PCDHGA10Q9Y5H3 936 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 CASTOR2A6NHX0 329 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 BCKDKO14874 412 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 GGT5P36269 586 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 NR4A2P43354 598 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 STC1P52823 247 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 ILF2Q12905 390 aaKnown RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 ALFQ53S48 1182 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 PIK3R6Q5UE93 754 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 LETMD1Q6P1Q0 360 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 CYP20A1Q6UW02 462 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 GPRIN3Q6ZVF9 776 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 B3GNT8Q7Z7M8 397 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 OR4L1Q8NH43 312 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 GPR21Q99679 349 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 BARD1Q99728 777 aaKnown RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 DERL2Q9GZP9 239 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 MIR1-1HGQ9H1L0 117 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 CDH9Q9ULB4 789 aa12.19□□□□□ -0.46
PCM1-203ENST00000517545 POLR3HQ9Y535 204 aaPredicted RBP12.19□□□□□ -0.46
PCM1-203ENST00000517545 A6NL46 340 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 LSM1O15116 133 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 SEC24AO95486 1093 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 SNAI1O95863 264 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 NPPAP01160 153 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 MAGP20916 626 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 ACVR2AP27037 513 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 NRG1Q02297 640 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 TOP3AQ13472 1001 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 SIM2Q14190 667 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 NPTX1Q15818 432 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 C18orf21Q32NC0 220 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 BRMS1LQ5PSV4 323 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 ATAD3BQ5T9A4 648 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 DCP2Q8IU60 420 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 RAVER1Q8IY67 606 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 ZNF548Q8NEK5 533 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 OR6J1Q8NGC5 347 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 GAD1Q99259 594 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 MIOSQ9NXC5 875 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 C3orf18Q9UK00 162 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 SEPHS1P49903 392 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 CDKN1CP49918 316 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 EPS8Q12929 822 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 PWP1Q13610 501 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 SMN1Q16637 294 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 NANOGNBQ7Z5D8 188 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 PHACTR4Q8IZ21 702 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 CLIP4Q8N3C7 705 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 EFHD2Q96C19 240 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 NSMCE3Q96MG7 304 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 SYT17Q9BSW7 474 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 SLIRPQ9GZT3 109 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 NECTIN3Q9NQS3 549 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 RPP40O75818 363 aaKnown RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 SERPINB1P30740 379 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 GRIK1P39086 918 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 IL1RL1Q01638 556 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
PCM1-203ENST00000517545 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 GTDC1Q4AE62 458 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 IL27RAQ6UWB1 636 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 DET1Q7L5Y6 550 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 LRRTM3Q86VH5 581 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 ARMC8Q8IUR7 673 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 LPPQ93052 612 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 DSN1Q9H410 356 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 GORASP2Q9H8Y8 452 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 NMUR1Q9HB89 426 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms