RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ADAMTSL5Q6ZMM2 481 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 KIAA0408Q6ZU52 694 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 TMEM135Q86UB9 458 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 LURAP1LQ8IV03 231 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 FAM186BQ8IYM0 893 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 DNAJC22Q8N4W6 341 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 CNTD1Q8N815 330 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 GJC3Q8NFK1 279 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 GDPD5Q8WTR4 605 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 IPCEF1Q8WWN9 437 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 KCNJ9Q92806 393 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 TRIM63Q969Q1 353 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 RMI2Q96E14 147 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 PPP1R16AQ96I34 528 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 DHDHQ9UQ10 334 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 CDK11AQ9UQ88 783 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 LZTS1Q9Y250 596 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 MRFAP1Q9Y605 127 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 TNKS1BP1Q9C0C2 1729 aaKnown RBP-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 ARHGAP23Q9P227 1491 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 OR6C68A6NDL8 312 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 TO15178 435 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 IRAK2O43187 625 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 GPR137BO60478 399 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 ZNF253O75346 499 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 MT-ND5P03915 603 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 KRT19P08727 400 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 BRAFP15056 766 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 ZNF8P17098 575 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 HTR1BP28222 390 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 AVPR2P30518 371 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 HTR1FP30939 366 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 GGT5P36269 586 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 NUDT1P36639 197 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 THOP1P52888 689 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 RCAN1P53805 252 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 ARSFP54793 590 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 CLDN20P56880 219 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 ALKBH1Q13686 389 aaKnown RBP-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 KLHL26Q53HC5 615 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 C9orf66Q5T8R8 295 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 LYSMD4Q5XG99 296 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 OTPQ5XKR4 325 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 GALNT7Q86SF2 657 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 MARVELD2Q8N4S9 558 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 CERS5Q8N5B7 392 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 MECRQ9BV79 373 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 MTMR12Q9C0I1 747 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 MYOZ1Q9NP98 299 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 WIPI2Q9Y4P8 454 aa-1.17□□□□□ -2.6
RNU6-539P-201ENST00000516665 LTBP1Q14766 1721 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 A0A0J9YXV3 536 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 B4DXG7 233 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 SYN3O14994 580 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 SEC14L5O43304 696 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 RBBP9O75884 186 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 UFL1O94874 794 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 UBXN7O94888 489 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 MMP9P14780 707 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 NR2F2P24468 414 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 CCNE1P24864 410 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 RPL34P49207 117 aaKnown RBP-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 EFNA3P52797 238 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 RNASELQ05823 741 aaKnown RBP-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 RBL2Q08999 1139 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 FOXF1Q12946 379 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 BLMHQ13867 455 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 GRM4Q14833 912 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 PTPROQ16827 1216 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 SLC22A6Q4U2R8 563 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 ASPRV1Q53RT3 343 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 ZNF311Q5JNZ3 666 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 SYCP2LQ5T4T6 812 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 FASTKD5Q7L8L6 764 aaKnown RBP-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 CPEB2Q7Z5Q1 589 aaKnown RBP-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 RNF130Q86XS8 419 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 NRROSQ86YC3 692 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 HOMER1Q86YM7 354 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 NGEFQ8N5V2 710 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 LINC01555Q8NAE3 123 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 OR6S1Q8NH40 331 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 THAP6Q8TBB0 222 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 WDR66Q8TBY9 1149 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 CSGALNACT1Q8TDX6 532 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 PHKBQ93100 1093 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 GRAMD2BQ96HH9 432 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 OVOL2Q9BRP0 275 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 UBQLN3Q9H347 655 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 CCDC134Q9H6E4 229 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 PPP1R3EQ9H7J1 279 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 B3GAT2Q9NPZ5 323 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 CUTCQ9NTM9 273 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 B3GAT1Q9P2W7 334 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 CLDN16Q9Y5I7 305 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 WSB1Q9Y6I7 421 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 NSD1Q96L73 2696 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 APCP25054 2843 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 ADGRF5Q8IZF2 1346 aa-1.18□□□□□ -2.6
RNU6-539P-201ENST00000516665 IGHV3-16A0A0C4DH30 117 aa-1.19□□□□□ -2.6
RNU6-539P-201ENST00000516665 PNMA6EA0A0J9YXQ4 647 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms