RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 LILRB1Q8NHL6 650 aaPredicted RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 RNF139Q8WU17 664 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 KAT2AQ92830 837 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 SLCO2A1Q92959 643 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 KIAA1191Q96A73 305 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 PGAP3Q96FM1 320 aaPredicted RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 ZDHHC12Q96GR4 267 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 CCDC114Q96M63 670 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 WWC2-AS2Q96NR7 200 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 DACH2Q96NX9 599 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 OR2M4Q96R27 311 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 NRTNQ99748 197 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 OLFM1Q99784 485 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 SOX7Q9BT81 388 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 C2orf49Q9BVC5 232 aaPredicted RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 NT5C1AQ9BXI3 368 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 TM6SF2Q9BZW4 377 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 KLC2Q9H0B6 622 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 SHARPINQ9H0F6 387 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 SUV39H2Q9H5I1 410 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 WDR26Q9H7D7 661 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 MRPL44Q9H9J2 332 aaKnown RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 EML4Q9HC35 981 aaKnown RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 FAM60AQ9NP50 221 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 OLFML3Q9NRN5 406 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 PNPLA3Q9NST1 481 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 TRMT1Q9NXH9 659 aaKnown RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 NDOR1Q9UHB4 597 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 VANGL2Q9ULK5 521 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 WDR37Q9Y2I8 494 aa2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.22□□□□□ -2.05
RNU1-48P-201ENST00000516400 IGLV3-12A0A075B6K2 115 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 LOC102723996A0A087X1L8 192 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 IGHV1-45A0A0A0MS14 117 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 TYW5A2RUC4 315 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MBD3L3A6NE82 208 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 FAM181BA6NEQ2 426 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 OR5K3A6NET4 321 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 FAM187AA6NFU0 413 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 FIGNL2A6NMB9 653 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 LRRIQ3A6PVS8 624 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 F5H5T6 163 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 LINC01387J3KSC0 135 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 PDE2AO00408 941 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 FOXN3O00409 490 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 KRIT1O00522 736 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 KIAA0391O15091 583 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 CHUKO15111 745 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 EPHB6O15197 1021 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 EIF3DO15371 548 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SLC16A3O15427 465 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 TMCC2O75069 709 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ADAM11O75078 769 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 GADD45BO75293 160 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 RASSF9O75901 435 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MED26O95402 600 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 PIGNO95427 931 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ZBTB11O95625 1053 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 TRUB2O95900 331 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MOCS2O96007 188 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 AVPP01185 164 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 IGHV4-39P01824 125 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ALBP02768 609 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 TP53P04637 393 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SERPINA7P05543 415 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 CD63P08962 238 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 CCDC166P0CW27 439 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 IDEP14735 1019 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ZNF8P17098 575 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 FPR1P21462 350 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 LHCGRP22888 699 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ZFP36P26651 326 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ACVR2AP27037 513 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 UQCRC1P31930 480 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 DDIT3P35638 169 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 PRPHP41219 470 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MAPK9P45984 424 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 RGRP47804 291 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SMCPP49901 116 aaPredicted RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ST13P50502 369 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ASCL1P50553 236 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MMP16P51512 607 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ZNF136P52737 540 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 DCDP81605 110 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MUC2Q02817 5179 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 BIRC3Q13489 604 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 NCOA4Q13772 614 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SQLEQ14534 574 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MCM6Q14566 821 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 IHHQ14623 411 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 MESDQ14696 234 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SLC9A5Q14940 896 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 CYTH1Q15438 398 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 TAF5Q15542 800 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 ZIC1Q15915 447 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 CNGA3Q16281 694 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SNRNP35Q16560 246 aaKnown RBP2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 CYP2A13Q16696 494 aa2.21□□□□□ -2.06
RNU1-48P-201ENST00000516400 SGSM1Q2NKQ1 1148 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms