RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 STAMQ92783 540 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 C3orf49Q96BT1 292 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 ATXN7L3BQ96GX2 97 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 ZNF486Q96H40 463 aaPredicted RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 BBS4Q96RK4 519 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 FNBP1Q96RU3 617 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 LGMNQ99538 433 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 PATZ1Q9HBE1 687 aaKnown RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 GPN1Q9HCN4 374 aaPredicted RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 NOB1Q9ULX3 412 aaKnown RBP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 CSNK1G3Q9Y6M4 447 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 MEGF6O75095 1541 aa0.11□□□□□ -2.39
SCARNA23-201ENST00000516060 CDC42BPBQ9Y5S2 1711 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 IGHV4-30-2A0A087WSY4 118 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 A0A0G2JLM5 398 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 A0A1W2PR80 420 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 PINLYPA6NC86 204 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 AQP12BA6NM10 295 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 C15orf62A8K5M9 175 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 SH3BGRLO75368 114 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 PRDM1O75626 825 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 ACTL6BO94805 426 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CCNDBP1O95273 360 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 IGKV1D-16P01601 117 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 TNNT1P13805 278 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 EFNA1P20827 205 aaPredicted RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 PTPN3P26045 913 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 PRELPP51888 382 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CDH15P55291 814 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 LRRC63Q05C16 580 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 HLTFQ14527 1009 aaKnown RBP eCLIP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 MTF1Q14872 753 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 COL28A1Q2UY09 1125 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 ZNF658BQ4V348 819 aaPredicted RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 KLHL26Q53HC5 615 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM209BQ5JX69 171 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 RNF187Q5TA31 235 aaPredicted RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 LCN10Q6JVE6 187 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 GPAT4Q86UL3 456 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 ZNF589Q86UQ0 364 aaPredicted RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CATSPERDQ86XM0 798 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CRYBG2Q8N1P7 616 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 PAF1Q8N7H5 531 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CSNK1G2-AS1Q8NCQ2 148 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 VANGL1Q8TAA9 524 aaPredicted RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 UTP15Q8TED0 518 aaKnown RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 SMPDL3BQ92485 455 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CNOT9Q92600 299 aaKnown RBP0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 SMC6Q96SB8 1091 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 MAP3K3Q99759 626 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 ATF6BQ99941 703 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 ZNF670Q9BS34 389 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 PLSCR3Q9NRY6 295 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CLEC5AQ9NY25 188 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 Q9UF83 564 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 RAB26Q9ULW5 256 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 FAM96BQ9Y3D0 163 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 YIPF1Q9Y548 306 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 CEP83Q9Y592 693 aa0.1□□□□□ -2.39
SCARNA23-201ENST00000516060 IGLV4-3A0A075B6K6 122 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 K7ENM7 598 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 VCYO14598 125 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 PER2O15055 1255 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 TMCC2O75069 709 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 IGHEP01854 428 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 HEXAP06865 529 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 NR2C1P13056 603 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 HSD3B1P14060 373 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 ZNF44P15621 663 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 CKMT2P17540 419 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 GIFP27352 417 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 SERPINF1P36955 418 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 AP2B1P63010 937 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 FOXD4Q12950 439 aaPredicted RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 MAD2L1Q13257 205 aaPredicted RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 VEPH1Q14D04 833 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 SMAD1Q15797 465 aaKnown RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 KPRPQ5T749 579 aaPredicted RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 CPLX2Q6PUV4 134 aaKnown RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 QSOX2Q6ZRP7 698 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 RRAGAQ7L523 313 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 G2E3Q7L622 706 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 CACNA2D4Q7Z3S7 1137 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 TDRPQ86YL5 185 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 TMEM139Q8IV31 216 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 OR4N5Q8IXE1 308 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 ZNF540Q8NDQ6 660 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 OR6S1Q8NH40 331 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 FLVCR1-AS1Q8TAF5 88 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 MAPK15Q8TD08 544 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 EID2BQ96D98 161 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 NSL1Q96IY1 281 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 SEMA3CQ99985 751 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 STRA6Q9BX79 667 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 IFIH1Q9BYX4 1025 aaKnown RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 USP44Q9H0E7 712 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 PABPC3Q9H361 631 aaKnown RBP0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 EPHX3Q9H6B9 360 aa0.09□□□□□ -2.4
SCARNA23-201ENST00000516060 CHST12Q9NRB3 414 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms