RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 RGMBQ6NW40 437 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 FAM47EQ6ZV65 393 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 CHST3Q7LGC8 479 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 GSTA5Q7RTV2 222 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 KMT5CQ86Y97 462 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 RNF113BQ8IZP6 322 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 CNPY4Q8N129 248 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 CCAR2Q8N163 923 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 LMNTD1Q8N9Z9 388 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 GOT1L1Q8NHS2 421 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 SPATA20Q8TB22 786 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 DEPDC1BQ8WUY9 529 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 SGCDQ92629 289 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 ABTB1Q969K4 478 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 IGSF8Q969P0 613 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 WBP2Q969T9 261 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 FAM162AQ96A26 154 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 RMDN1Q96DB5 314 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 MMABQ96EY8 250 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 RRNAD1Q96FB5 475 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 C1orf74Q96LT6 269 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 HARBI1Q96MB7 349 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 RAB3IPQ96QF0 476 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 GPATCH1Q9BRR8 931 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 FKRPQ9H9S5 495 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 KIF9Q9HAQ2 790 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 TRPV4Q9HBA0 871 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 DLGAP2Q9P1A6 1054 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 SEC63Q9UGP8 760 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 ANAPC5Q9UJX4 755 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 MKLN1Q9UL63 735 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 LOXL2Q9Y4K0 774 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 PCDHAC2Q9Y5I4 1007 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 A2ML1A8K2U0 1454 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 NLRP1Q9C000 1473 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 SHANK2Q9UPX8 1470 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 RIMS1Q86UR5 1692 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 NPHP4O75161 1426 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 FYCO1Q9BQS8 1478 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 LOC100509620A0A075B734 347 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ASPDHA6ND91 283 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 CTDSP2O14595 271 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 SLC7A4O43246 635 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 HCRTR2O43614 444 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 HTATSF1O43719 755 aaKnown RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 TGDSO95455 350 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GABRB1P18505 474 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 FUT6P51993 359 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ZNF132P52740 706 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 TAS2R38P59533 333 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 PSMC6P62333 389 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ARL16Q0P5N6 197 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GRIK2Q13002 908 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GAGE5Q13069 117 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GAGE6Q13070 117 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ZNF234Q14588 700 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 TTC31Q49AM3 519 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 CDONQ4KMG0 1287 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GKAP1Q5VSY0 366 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 LCN10Q6JVE6 187 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 DENND5BQ6ZUT9 1274 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 CCDC91Q7Z6B0 441 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 DNAJB7Q7Z6W7 309 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 METTL23Q86XA0 190 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 CEP97Q8IW35 865 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 DCUN1D3Q8IWE4 304 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.12□□□□□ -1.91
HERC4-215ENST00000515753 HACE1Q8IYU2 909 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 NUP93Q8N1F7 819 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 BEST3Q8N1M1 668 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ARL10Q8N8L6 244 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GDAP1Q8TB36 358 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 DUSP19Q8WTR2 217 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 VPS33AQ96AX1 596 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ARHGEF26Q96DR7 871 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 SAT2Q96F10 170 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 CDCA5Q96FF9 252 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 QRFPRQ96P65 431 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GBP5Q96PP8 586 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 UHRF2Q96PU4 802 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 GCNAQ96QF7 691 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 SEPT5Q99719 369 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 CITED2Q99967 270 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 PCGF1Q9BSM1 259 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 PFDN4Q9NQP4 134 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 RRP7BPQ9NSQ0 103 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ACSS1Q9NUB1 689 aaPredicted RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 PADI3Q9ULW8 664 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 RICTORQ6R327 1708 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 ABCC1P33527 1531 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 PDS5AQ29RF7 1337 aaKnown RBP3.12□□□□□ -1.91
HERC4-215ENST00000515753 SPATA31D1Q6ZQQ2 1576 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 DIP2CQ9Y2E4 1556 aa3.12□□□□□ -1.91
HERC4-215ENST00000515753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.12□□□□□ -1.91
HERC4-215ENST00000515753 CAMSAP1Q5T5Y3 1602 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CEP162Q5TB80 1403 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PREX1Q8TCU6 1659 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 MED14O60244 1454 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PZPP20742 1482 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms