RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 COG4Q9H9E3 785 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 XAB2Q9HCS7 855 aaKnown RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 KCND1Q9NSA2 647 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 SMARCAL1Q9NZC9 954 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 TMEM9Q9P0T7 183 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 SLC2A6Q9UGQ3 507 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 ANAPC5Q9UJX4 755 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 PCDHGA3Q9Y5H0 932 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 LAMA5O15230 3695 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 OR51F1A6NGY5 319 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 OR56A5P0C7T3 313 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 PRSS56P0CW18 603 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 HGFP14210 728 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 AMD1P17707 334 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 ITIH1P19827 911 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 MAPK9P45984 424 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 TTPAP49638 278 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 TLE3Q04726 772 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 TRIP13Q15645 432 aaPredicted RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 BROXQ5VW32 411 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 PRSS42Q7Z5A4 293 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 CFAP206Q8IYR0 622 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 CLDN19Q8N6F1 224 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 GPR150Q8NGU9 434 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 OR6P1Q8NGX9 317 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 CPT1BQ92523 772 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 RMDN2Q96LZ7 410 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 TEFMQ96QE5 360 aaKnown RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 DDA1Q9BW61 102 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 WWP1Q9H0M0 922 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 OR52A5Q9H2C5 316 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 CHRAC1Q9NRG0 131 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 IMP3Q9NV31 184 aaKnown RBP12.49□□□□□ -0.41
CLCN3-210ENST00000515420 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 SOX13Q9UN79 622 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 COLEC10Q9Y6Z7 277 aa12.49□□□□□ -0.41
CLCN3-210ENST00000515420 PRAMEF33A0A0G2JMD5 474 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 IFRD1O00458 451 aaPredicted RBP12.48□□□□□ -0.41
CLCN3-210ENST00000515420 PRAMEF10O60809 474 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 FGF3P11487 239 aaPredicted RBP12.48□□□□□ -0.41
CLCN3-210ENST00000515420 CCL4P13236 92 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 ETV5P41161 510 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 GNG11P61952 73 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 COL28A1Q2UY09 1125 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 JAMLQ86YT9 394 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 BMPERQ8N8U9 685 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
CLCN3-210ENST00000515420 RSC1A1Q92681 617 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 ZDHHC12Q96GR4 267 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 ZPBPQ9BS86 351 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 TSSK1BQ9BXA7 367 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF768Q9H5H4 540 aaKnown RBP12.48□□□□□ -0.41
CLCN3-210ENST00000515420 MVB12BQ9H7P6 319 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 FBXO8Q9NRD0 319 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 CATSPERZQ9NTU4 200 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 SYBUQ9NX95 663 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 SLC24A2Q9UI40 661 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 CHD6Q8TD26 2715 aa12.48□□□□□ -0.41
CLCN3-210ENST00000515420 ITPR1Q14643 2758 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 MAGEB16A2A368 324 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CTAGE9A4FU28 777 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 C9orf172C9J069 976 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF185O15231 689 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CD3EAPO15446 510 aaKnown RBP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CAPN5O15484 640 aaPredicted RBP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 TMEM63AO94886 807 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 POLBP06746 335 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 LIPCP11150 499 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 PAMP19021 973 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 MPSTP25325 297 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 MGAT1P26572 445 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 ITPKBP27987 946 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 MAGEA3P43357 314 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 VPS41P49754 854 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 MAPK10P53779 464 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 GFERP55789 205 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CRADDP78560 199 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 MC2RQ01718 297 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 PLCL1Q15111 1095 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 KIAA0930Q6ICG6 404 aaPredicted RBP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CYB5D1Q6P9G0 228 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 PDZD3Q86UT5 571 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 LRRC6Q86X45 466 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms