RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 FSHRP23945 695 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 ARNTP27540 789 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 FMO3P31513 532 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 SOX6P35712 828 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF33AQ06730 810 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 ESRP1Q6NXG1 681 aaKnown RBP12.64□□□□□ -0.39
SMAD1-215ENST00000515385 ZFAND1Q8TCF1 268 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 TBC1D20Q96BZ9 403 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 TTYH2Q9BSA4 534 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 GABARAPL1Q9H0R8 117 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 CDT1Q9H211 546 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 FZD8Q9H461 694 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 ZBTB20Q9HC78 741 aaPredicted RBP12.64□□□□□ -0.39
SMAD1-215ENST00000515385 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 TMEFF2Q9UIK5 374 aaPredicted RBP12.64□□□□□ -0.39
SMAD1-215ENST00000515385 DNMT3LQ9UJW3 386 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 FZD1Q9UP38 647 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 CFL2Q9Y281 166 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 BTRCQ9Y297 605 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 DSCR3O14972 297 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 NOS1APO75052 506 aaPredicted RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 ANXA9O76027 345 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 PGLSO95336 258 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 SLC4A1P02730 911 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 FTH1P02794 183 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 ERCC2P18074 760 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 IL12RB1P42701 662 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 FBXO43Q4G163 708 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 BCL7AQ4VC05 210 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 FAM160B1Q5W0V3 765 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TXNDC11Q6PKC3 985 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 RNF149Q8NC42 400 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 SLC7A6Q92536 515 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 C12orf42Q96LP6 360 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 CITED4Q96RK1 184 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 SLC9A7Q96T83 725 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TEX13BQ9BXU2 312 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 MIR1-1HGQ9H1L0 117 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 PLSCR3Q9NRY6 295 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 INTS7Q9NVH2 962 aaKnown RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 USP22Q9UPT9 525 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 MYO18AQ92614 2054 aaKnown RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 A0A087WZ62 844 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 MEIOCA2RUB1 952 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 SOWAHBA6NEL2 793 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 PDPK1O15530 556 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF780AO75290 641 aaPredicted RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 LINC00032P0C843 101 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TSPAN8P19075 237 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 CFL1P23528 166 aaKnown RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 IGFBP5P24593 272 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 SOX11P35716 441 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 PIK3CBP42338 1070 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 CASP2P42575 452 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 BCAT1P54687 386 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 DIO3P55073 304 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 PRKG2Q13237 762 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 GPAT3Q53EU6 434 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TOR1AIP1Q5JTV8 583 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 PIK3R6Q5UE93 754 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 NXNL2Q5VZ03 156 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 LRRC8DQ7L1W4 858 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 ISCA2Q86U28 154 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 UNC93AQ86WB7 457 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 NETO2Q8NC67 525 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 FRS2Q8WU20 508 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 FAM167AQ96KS9 214 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TSGA13Q96PP4 275 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TMEM209Q96SK2 561 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 RSPH9Q9H1X1 276 aaPredicted RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 TUBB1Q9H4B7 451 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 DBNDD1Q9H9R9 158 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 RNF146Q9NTX7 359 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
SMAD1-215ENST00000515385 GIMAP2Q9UG22 337 aa12.63□□□□□ -0.39
SMAD1-215ENST00000515385 A0A0G2JMP0 313 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 hCG_2039718K7EN88 272 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 STX7O15400 261 aaKnown RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 CRCPO75575 148 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 SLITRK5O94991 958 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 WISP3O95389 354 aaPredicted RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 CD4P01730 458 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 ICAM3P32942 547 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 PTGS2P35354 604 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 SCNN1GP51170 649 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms