RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 LGALS13Q9UHV8 139 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 ACSL5Q9ULC5 683 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 KCNK6Q9Y257 313 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 DNAJC16Q9Y2G8 782 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 PLEKHM1Q9Y4G2 1056 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 SLC5A10A0PJK1 596 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 SMIM23A6NLE4 172 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 LMO7DNF2Z398 122 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 EIF3FO00303 357 aaPredicted RBP20.58■□□□□ 0.89
LSM6-207ENST00000515311 GPC4O75487 556 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 SLCO2B1O94956 709 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 ZNF883P0CG24 379 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 SAT1P21673 171 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 IDSP22304 550 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 DGKAP23743 735 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 ACTR1BP42025 376 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 SERPINB8P50452 374 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 CCT8P50990 548 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 RAB10P61026 200 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 ACTR1AP61163 376 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 PDAP1Q13442 181 aaKnown RBP20.58■□□□□ 0.89
LSM6-207ENST00000515311 NFE2L1Q14494 772 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 FAM83HQ6ZRV2 1179 aaPredicted RBP20.58■□□□□ 0.89
LSM6-207ENST00000515311 CCDC91Q7Z6B0 441 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 GKN2Q86XP6 184 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 CEP97Q8IW35 865 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 SIDT2Q8NBJ9 832 aaKnown RBP20.58■□□□□ 0.89
LSM6-207ENST00000515311 CCL4L1Q8NHW4 92 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 LMX1AQ8TE12 382 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 TMEM159Q96B96 161 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 GTPBP2Q9BX10 602 aaKnown RBP20.58■□□□□ 0.89
LSM6-207ENST00000515311 DPEP2Q9H4A9 486 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 OSGEPL1Q9H4B0 414 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 CAAP1Q9H8G2 361 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 VIPAS39Q9H9C1 493 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 CAB39LQ9H9S4 337 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 SEMA4GQ9NTN9 838 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 CTNNAL1Q9UBT7 734 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 PCOLCE2Q9UKZ9 415 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 CDYLQ9Y232 598 aa20.58■□□□□ 0.89
LSM6-207ENST00000515311 TRIM49D1C9J1S8 452 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 ALDOAP04075 364 aaKnown RBP20.57■□□□□ 0.88
LSM6-207ENST00000515311 CELA2BP08218 269 aaPredicted RBP20.57■□□□□ 0.88
LSM6-207ENST00000515311 CBSLP0DN79 551 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 AK4P27144 223 aaPredicted RBP20.57■□□□□ 0.88
LSM6-207ENST00000515311 CRABP2P29373 138 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 CBSP35520 551 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 MAGEA12P43365 314 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 CSRP3P50461 194 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 ATXN3P54252 364 aaPredicted RBP20.57■□□□□ 0.88
LSM6-207ENST00000515311 HSPA14Q0VDF9 509 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 SF3A2Q15428 464 aaKnown RBP20.57■□□□□ 0.88
LSM6-207ENST00000515311 AGAP9Q5VTM2 703 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 SLC30A9Q6PML9 568 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 LVRNQ6Q4G3 990 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 WASH2PQ6VEQ5 465 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 TIFABQ6ZNK6 161 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 KANSL1Q7Z3B3 1105 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 TAF8Q7Z7C8 310 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 MINDY1Q8N5J2 469 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 SLC30A3Q99726 388 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 IL21RQ9HBE5 538 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 WASH6PQ9NQA3 447 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.57■□□□□ 0.88
LSM6-207ENST00000515311 FAM8A1Q9UBU6 413 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 TBK1Q9UHD2 729 aa20.57■□□□□ 0.88
LSM6-207ENST00000515311 TLDC2A0PJX2 215 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 NEMP2A6NFY4 417 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 PCDHGA12O60330 932 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 SDC3O75056 442 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 WISP3O95389 354 aaPredicted RBP20.56■□□□□ 0.88
LSM6-207ENST00000515311 ENO3P13929 434 aaPredicted RBP20.56■□□□□ 0.88
LSM6-207ENST00000515311 C1orf61Q13536 156 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 KRT71Q3SY84 523 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 LRRC8EQ6NSJ5 796 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 PAQR3Q6TCH7 311 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 SLC22A15Q8IZD6 547 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 SLC25A45Q8N413 288 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 LILRA3Q8N6C8 439 aaPredicted RBP20.56■□□□□ 0.88
LSM6-207ENST00000515311 SAP25Q8TEE9 199 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 MZB1Q8WU39 189 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 SYTL2Q9HCH5 934 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 SNX15Q9NRS6 342 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 DNAAF2Q9NVR5 837 aaKnown RBP20.56■□□□□ 0.88
LSM6-207ENST00000515311 UCKL1Q9NWZ5 548 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 TAAR2Q9P1P5 351 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 TBC1D29Q9UFV1 150 aa20.56■□□□□ 0.88
LSM6-207ENST00000515311 CABIN1Q9Y6J0 2220 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 A6NCN8 305 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 DYNC1I1O14576 645 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 TPP1O14773 563 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 SLC35G4P0C7Q5 338 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 ZNF37AP17032 561 aaPredicted RBP20.55■□□□□ 0.88
LSM6-207ENST00000515311 TYK2P29597 1187 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 PREPP48147 710 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 RGS4P49798 205 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 IL2P60568 153 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 IL9RQ01113 521 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 BNIP3Q12983 259 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 TCEA2Q15560 299 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms