RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 VRK3Q8IV63 474 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 CTAGE3PQ8IX95 158 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 PPM1NQ8N819 430 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 ARL10Q8N8L6 244 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 GPATCH11Q8N954 259 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 OR2L2Q8NH16 312 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 GIMAP7Q8NHV1 300 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 HM13Q8TCT9 377 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 CALML6Q8TD86 181 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 ZNF514Q96K75 400 aaPredicted RBP9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 LINC00615Q96LM1 132 aaPredicted RBP9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 BIRC8Q96P09 236 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 SLC30A3Q99726 388 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 CCM2Q9BSQ5 444 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 FAM129AQ9BZQ8 928 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 FOXP3Q9BZS1 431 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 WWP1Q9H0M0 922 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 INTS10Q9NVR2 710 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 MOCS1Q9NZB8 636 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 RABGEF1Q9UJ41 708 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 RUVBL2Q9Y230 463 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 RNF215Q9Y6U7 377 aa9.61□□□□□ -0.87
TOPBP1-209ENST00000513818 KRT87PA6NCN2 255 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 FAM159BA6NKW6 160 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 TPP1O14773 563 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 AHSGP02765 367 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 FTH1P02794 183 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 SLC35G4P0C7Q5 338 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 F3P13726 295 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 VCLP18206 1134 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 SAT1P21673 171 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 RPS3P23396 243 aaKnown RBP eCLIP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 PPARGP37231 505 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 CD151P48509 253 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 ACADVLP49748 655 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 CDKN2DP55273 166 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 DMPKQ09013 629 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 HSPA14Q0VDF9 509 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 ZNF460Q14592 562 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 TRIP6Q15654 476 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 C14orf28Q4W4Y0 310 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 STRA8Q7Z7C7 330 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 ARL14Q8N4G2 192 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 SIDT2Q8NBJ9 832 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 GPR156Q8NFN8 814 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 MAPK15Q8TD08 544 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 SCG3Q8WXD2 468 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 CCDC74AQ96AQ1 378 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 C12orf66Q96MD2 445 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 TCF12Q99081 682 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 GPR21Q99679 349 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 NRTNQ99748 197 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 OLFM1Q99784 485 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 AARSD1Q9BTE6 412 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 DUSP23Q9BVJ7 150 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 CCDC68Q9H2F9 335 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 IMP3Q9NV31 184 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 ZNF624Q9P2J8 865 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 MED16Q9Y2X0 877 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 PCDHB1Q9Y5F3 818 aa9.6□□□□□ -0.87
TOPBP1-209ENST00000513818 E5RI56 91 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 QSOX1O00391 747 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 PFDN6O15212 129 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 ESR1P03372 595 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 CHRM3P20309 590 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 IDSP22304 550 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 TNFRSF8P28908 595 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 STX2P32856 288 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 GMPRP36959 345 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 SLC19A1P41440 591 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 LEPRP48357 1165 aaKnown RBP9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 PMS2P54278 862 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 SIM1P81133 766 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 BIRC2Q13490 618 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 BMPR2Q13873 1038 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 FRG1Q14331 258 aaKnown RBP9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 UAP1Q16222 522 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 ACSBG2Q5FVE4 666 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 METRNLQ641Q3 311 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 LVRNQ6Q4G3 990 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 LRRC6Q86X45 466 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 CPNE9Q8IYJ1 553 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 SDR16C5Q8N3Y7 309 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 SFRP1Q8N474 314 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 ZBTB2Q8N680 514 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 Q8N9G6 341 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 FAM181AQ8N9Y4 354 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 IFI44Q8TCB0 444 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 CDKL2Q92772 493 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 ELMO2Q96JJ3 720 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 INSM2Q96T92 566 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 RTKNQ9BST9 563 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 TXLNGYQ9BZA5 131 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 OR52A5Q9H2C5 316 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 EPB41L4BQ9H329 900 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 ALG2Q9H553 416 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 SLC32A1Q9H598 525 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 CAB39LQ9H9S4 337 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms