RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 LPCAT1Q8NF37 534 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 OR1N1Q8NGS0 311 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 NR4A3Q92570 626 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 MAGEB10Q96LZ2 347 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-211ENST00000513803 PCDHB18PQ96TA0 734 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 SNRNP25Q9BV90 132 aaKnown RBP10.54□□□□□ -0.72
NFKB1-211ENST00000513803 TDRD1Q9BXT4 1180 aaKnown RBP10.54□□□□□ -0.72
NFKB1-211ENST00000513803 PCDH9Q9HC56 1237 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 C1GALT1Q9NS00 363 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 HAUS2Q9NVX0 235 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 NDOR1Q9UHB4 597 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 ANKRD12Q6UB98 2062 aa10.54□□□□□ -0.72
NFKB1-211ENST00000513803 CCDC66A2RUB6 948 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ANKRD66B4E2M5 251 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 PES1O00541 588 aaKnown RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 DDX3YO15523 660 aaKnown RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 RNF8O76064 485 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 UNC5CO95185 931 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 CLDN14O95500 239 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ESRRAP11474 423 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 PSMA2P25787 234 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 KIR3DL1P43629 444 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 KPNA2P52292 529 aaKnown RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 DCDP81605 110 aaKnown RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 GTF2H3Q13889 308 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 TPD52L1Q16890 204 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 CLEC16AQ2KHT3 1053 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ALS2CLQ60I27 953 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ZNF385CQ66K41 422 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 FBXO38Q6PIJ6 1188 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ISLR2Q6UXK2 745 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 C11orf96Q7Z7L8 435 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 AMZ2Q86W34 360 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 LRRC49Q8IUZ0 686 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 CHDHQ8NE62 594 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 GPR150Q8NGU9 434 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 TTC25Q96NG3 672 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 LMF1Q96S06 567 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 NUP85Q9BW27 656 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 AP1M1Q9BXS5 423 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 ZFYVE1Q9HBF4 777 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 IMP3Q9NV31 184 aaKnown RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 DTLQ9NZJ0 730 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 IFT80Q9P2H3 777 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-211ENST00000513803 PSMD13Q9UNM6 376 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 AP1M2Q9Y6Q5 423 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 DOCK10Q96BY6 2186 aa10.53□□□□□ -0.72
NFKB1-211ENST00000513803 CCDC88CQ9P219 2028 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 CACNA1CQ13936 2221 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 CCDC78A2IDD5 438 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 H3BRJ5 948 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 C19orf84I3L1E1 186 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 MATN2O00339 956 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 MTX2O75431 263 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 MTHFD1P11586 935 aaKnown RBP10.52□□□□□ -0.73
NFKB1-211ENST00000513803 AMPD1P23109 780 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 ARL4AP40617 200 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 DCDC1P59894 354 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 OGDHQ02218 1023 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 TMEM115Q12893 351 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-211ENST00000513803 XRCC4Q13426 336 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 GALNT3Q14435 633 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 SYCP1Q15431 976 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 ZFYVE27Q5T4F4 411 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 MON1BQ7L1V2 547 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 BEND7Q8N7W2 519 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-211ENST00000513803 GPR26Q8NDV2 337 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 CATSPER1Q8NEC5 780 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 BRSK1Q8TDC3 778 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 N4BP2L2Q92802 583 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-211ENST00000513803 PPM1MQ96MI6 270 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.73
NFKB1-211ENST00000513803 TUBGCP2Q9BSJ2 902 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 ADGRE3Q9BY15 652 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 LHPPQ9H008 270 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 SH3BGRL2Q9UJC5 107 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 FBXL4Q9UKA2 621 aa10.52□□□□□ -0.73
NFKB1-211ENST00000513803 POP7O75817 140 aaKnown RBP10.51□□□□□ -0.73
NFKB1-211ENST00000513803 CRYABP02511 175 aaKnown RBP10.51□□□□□ -0.73
NFKB1-211ENST00000513803 CBSLP0DN79 551 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 POLR2CP19387 275 aaPredicted RBP10.51□□□□□ -0.73
NFKB1-211ENST00000513803 MMP11P24347 488 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 MIPP30301 263 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 SERPINB6P35237 376 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 CBSP35520 551 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 SOX5P35711 763 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 PPP2R2AP63151 447 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 DSC2Q02487 901 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 DMPKQ09013 629 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 Q0VFX4 171 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 MFAP5Q13361 173 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 IHHQ14623 411 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 INAQ16352 499 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 QPCTQ16769 361 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 C1orf189Q5VU69 101 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 ALG1LQ6GMV1 187 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 LINC00696Q6ZRV3 163 aa10.51□□□□□ -0.73
NFKB1-211ENST00000513803 TGIF2LYQ8IUE0 185 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms