RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF542PQ5EBM4 170 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PPM1JQ5JR12 505 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 METRNLQ641Q3 311 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 NAPRTQ6XQN6 538 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 RD3Q7Z3Z2 195 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 EXOC3L1Q86VI1 746 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 SRRM1Q8IYB3 904 aaKnown RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 CFAP206Q8IYR0 622 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PHACTR4Q8IZ21 702 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 GOLGA6L1Q8N7Z2 621 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 TLCD1Q96CP7 247 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PDLIM5Q96HC4 596 aaKnown RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 UBXN10Q96LJ8 280 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 TCEAL2Q9H3H9 227 aaPredicted RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 DNAJC28Q9NX36 388 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 NOVA2Q9UNW9 492 aaKnown RBP12.3□□□□□ -0.44
PDPN-210ENST00000513143 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 ACOT9Q9Y305 439 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PLEKHM1Q9Y4G2 1056 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PCDHGA5Q9Y5G8 931 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
PDPN-210ENST00000513143 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 GOLGA8RI6L899 631 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SNPHO15079 494 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SCAMP1O15126 338 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 TSPAN12O95859 305 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 COL6A2P12110 1019 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 ENO3P13929 434 aaPredicted RBP12.29□□□□□ -0.44
PDPN-210ENST00000513143 JUNDP17535 347 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 KRT4P19013 534 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 DGKAP23743 735 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 RGS4P49798 205 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 IL2P60568 153 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 CTBSQ01459 385 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 HSPA14Q0VDF9 509 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 NFE2L1Q14494 772 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SYTL3Q4VX76 610 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 TTMPQ5BVD1 217 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SLC23A3Q6PIS1 610 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 FAM83HQ6ZRV2 1179 aaPredicted RBP12.29□□□□□ -0.44
PDPN-210ENST00000513143 CLEC14AQ86T13 490 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 TBC1D1Q86TI0 1168 aaPredicted RBP12.29□□□□□ -0.44
PDPN-210ENST00000513143 CPNE9Q8IYJ1 553 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 NKAPQ8N5F7 415 aaKnown RBP12.29□□□□□ -0.44
PDPN-210ENST00000513143 LILRA3Q8N6C8 439 aaPredicted RBP12.29□□□□□ -0.44
PDPN-210ENST00000513143 GPBAR1Q8TDU6 330 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 EEF1AKMT1Q8WVE0 214 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 ANKRD49Q8WVL7 239 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 GLMNQ92990 594 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 TMEM159Q96B96 161 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 ATP6V1G3Q96LB4 118 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SLC13A1Q9BZW2 595 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 TMEM168Q9H0V1 697 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 IRF2BPLQ9H1B7 796 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 KCNH6Q9H252 994 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 VPS11Q9H270 941 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 CAPN10Q9HC96 672 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 KLC4Q9NSK0 619 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 ACSL5Q9ULC5 683 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SLC6A14Q9UN76 642 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
PDPN-210ENST00000513143 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 SNX11Q9Y5W9 270 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 ST14Q9Y5Y6 855 aa12.29□□□□□ -0.44
PDPN-210ENST00000513143 ANKRD12Q6UB98 2062 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 CABIN1Q9Y6J0 2220 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 LTA4HP09960 611 aaKnown RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 CCDC166P0CW27 439 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 GMPRP36959 345 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 MPLP40238 635 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 PREPP48147 710 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 RXRGP48443 463 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 MAGOHP61326 146 aaKnown RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 HNRNPKP61978 463 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDPN-210ENST00000513143 IRF9Q00978 393 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 DLG1Q12959 904 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 LRRC8EQ6NSJ5 796 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 CYHR1Q6ZMK1 362 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 NEK10Q6ZWH5 1172 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 LCA5Q86VQ0 697 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 NRROSQ86YC3 692 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 VRK3Q8IV63 474 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 SLC22A15Q8IZD6 547 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 CENPLQ8N0S6 344 aaPredicted RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 C4orf33Q8N1A6 199 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 PLD6Q8N2A8 252 aaKnown RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 BANPQ8N9N5 519 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 SUMF1Q8NBK3 374 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 CCL4L1Q8NHW4 92 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 LINGO1Q96FE5 620 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 DERL2Q9GZP9 239 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms