RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR4C6Q8NH72 309 aa8.82□□□□□ -1
VCAN-208ENST00000512590 KCNH6Q9H252 994 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ALG9Q9H6U8 611 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CCSER2Q9H7U1 834 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PLEKHA3Q9HB20 300 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ABCB6Q9NP58 842 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CIDEBQ9UHD4 219 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PHTF1Q9UMS5 762 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CPQQ9Y646 472 aa8.82□□□□□ -1
VCAN-208ENST00000512590 A6NHS1 94 aa8.82□□□□□ -1
VCAN-208ENST00000512590 AXIN1O15169 862 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZBTB22O15209 634 aa8.82□□□□□ -1
VCAN-208ENST00000512590 S100A6P06703 90 aa8.82□□□□□ -1
VCAN-208ENST00000512590 IFNGR1P15260 489 aa8.82□□□□□ -1
VCAN-208ENST00000512590 TYRP1P17643 537 aa8.82□□□□□ -1
VCAN-208ENST00000512590 NR2C2P49116 596 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ADAM8P78325 824 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CPSF6Q16630 551 aaKnown RBP eCLIP8.82□□□□□ -1
VCAN-208ENST00000512590 PTPRNQ16849 979 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CCDC36Q8IYA8 594 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CNEP1R1Q8N9A8 125 aa8.82□□□□□ -1
VCAN-208ENST00000512590 COPS5Q92905 334 aa8.82□□□□□ -1
VCAN-208ENST00000512590 RAPGEF6Q8TEU7 1601 aa8.82□□□□□ -1
VCAN-208ENST00000512590 A0A0U1RQJ8 604 aa8.82□□□□□ -1
VCAN-208ENST00000512590 EFCAB7A8K855 629 aa8.82□□□□□ -1
VCAN-208ENST00000512590 FBP2O00757 339 aa8.82□□□□□ -1
VCAN-208ENST00000512590 COQ9O75208 318 aa8.82□□□□□ -1
VCAN-208ENST00000512590 IGHEP01854 428 aa8.82□□□□□ -1
VCAN-208ENST00000512590 HBQ1P09105 142 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PPIBP23284 216 aaKnown RBP8.82□□□□□ -1
VCAN-208ENST00000512590 PTX3P26022 381 aaPredicted RBP8.82□□□□□ -1
VCAN-208ENST00000512590 BRCC3P46736 316 aa8.82□□□□□ -1
VCAN-208ENST00000512590 USP46P62068 366 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CDK18Q07002 472 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CASP8Q14790 479 aa8.82□□□□□ -1
VCAN-208ENST00000512590 TTLQ8NG68 377 aa8.82□□□□□ -1
VCAN-208ENST00000512590 BPIFB1Q8TDL5 484 aa8.82□□□□□ -1
VCAN-208ENST00000512590 HLA-CQ95604 372 aa8.82□□□□□ -1
VCAN-208ENST00000512590 MUCL1Q96DR8 90 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PDCD2LQ9BRP1 358 aa8.82□□□□□ -1
VCAN-208ENST00000512590 NUAK2Q9H093 628 aa8.82□□□□□ -1
VCAN-208ENST00000512590 AGPAT4Q9NRZ5 378 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CNOT11Q9UKZ1 510 aaKnown RBP8.82□□□□□ -1
VCAN-208ENST00000512590 GGT3PA6NGU5 568 aa8.81□□□□□ -1
VCAN-208ENST00000512590 B8ZZF3 427 aa8.81□□□□□ -1
VCAN-208ENST00000512590 UCHL3P15374 230 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ACVR2AP27037 513 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PRKAA2P54646 552 aa8.81□□□□□ -1
VCAN-208ENST00000512590 FOXC1Q12948 553 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TAF10Q12962 218 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GCNT7Q6ZNI0 430 aa8.81□□□□□ -1
VCAN-208ENST00000512590 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
VCAN-208ENST00000512590 AMZ2Q86W34 360 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ARHGAP12Q8IWW6 846 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SPAG16Q8N0X2 631 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ARL10Q8N8L6 244 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PIGXQ8TBF5 258 aa8.81□□□□□ -1
VCAN-208ENST00000512590 WNT8BQ93098 351 aa8.81□□□□□ -1
VCAN-208ENST00000512590 LRRC58Q96CX6 371 aa8.81□□□□□ -1
VCAN-208ENST00000512590 VCPIP1Q96JH7 1222 aa8.81□□□□□ -1
VCAN-208ENST00000512590 P2RY13Q9BPV8 354 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PPP4R1LQ9P1A2 415 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ZNF180Q9UJW8 692 aa8.81□□□□□ -1
VCAN-208ENST00000512590 LOC100506127A0A0U1RQW1 187 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GSG1L2A8MUP6 293 aa8.81□□□□□ -1
VCAN-208ENST00000512590 MDM4O15151 490 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CHST10O43529 356 aa8.81□□□□□ -1
VCAN-208ENST00000512590 IFNA21P01568 189 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PSPHP78330 225 aa8.81□□□□□ -1
VCAN-208ENST00000512590 MZT1Q08AG7 82 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TUSC3Q13454 348 aa8.81□□□□□ -1
VCAN-208ENST00000512590 NR0B2Q15466 257 aa8.81□□□□□ -1
VCAN-208ENST00000512590 C3orf38Q5JPI3 329 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SLC30A10Q6XR72 485 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SPOCD1Q6ZMY3 1216 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ZBTB49Q6ZSB9 765 aa8.81□□□□□ -1
VCAN-208ENST00000512590 OR14L1PQ8NHC6 308 aa8.81□□□□□ -1
VCAN-208ENST00000512590 AP3S1Q92572 193 aa8.81□□□□□ -1
VCAN-208ENST00000512590 UCN3Q969E3 161 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GORASP1Q9BQQ3 440 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CHCHD6Q9BRQ6 235 aa8.81□□□□□ -1
VCAN-208ENST00000512590 HHATLQ9HCP6 504 aa8.81□□□□□ -1
VCAN-208ENST00000512590 DNAJB11Q9UBS4 358 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ATPIF1Q9UII2 106 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ATP6AP2A0A1C7CYW4 349 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TP73O15350 636 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CPNE3O75131 537 aaKnown RBP8.81□□□□□ -1
VCAN-208ENST00000512590 ATP6AP2O75787 350 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ADH1BP00325 375 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TRBC1P01850 177 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SFTPBP07988 381 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PLK1P53350 603 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GYS2P54840 703 aa8.81□□□□□ -1
VCAN-208ENST00000512590 OR2B6P58173 313 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TMEM201Q5SNT2 666 aa8.81□□□□□ -1
VCAN-208ENST00000512590 RNASEH2BQ5TBB1 312 aaKnown RBP8.81□□□□□ -1
VCAN-208ENST00000512590 LYSMD4Q5XG99 296 aa8.81□□□□□ -1
VCAN-208ENST00000512590 MED27Q6P2C8 311 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GPR180Q86V85 440 aa8.81□□□□□ -1
VCAN-208ENST00000512590 DHFR2Q86XF0 187 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms