RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM26Q6ZUK4 368 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 FLAD1Q8NFF5 587 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC20A1Q8WUM9 679 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 WDR60Q8WVS4 1066 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 DPF1Q92782 380 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 EZH1Q92800 747 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 GTF3C6Q969F1 213 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 WBP2Q969T9 261 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 LRIG1Q96JA1 1093 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 ASPNQ9BXN1 380 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC6A15Q9H2J7 730 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 LRRC19Q9H756 370 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 RDH8Q9NYR8 311 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 POLKQ9UBT6 870 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 RHBDD3Q9Y3P4 386 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 LOC105369274A0A096LPK9 316 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 LOC102723532A0A0G2JNH3 316 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 C4orf47A7E2U8 309 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC30A4O14863 429 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 CRTAPO75718 401 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 B4GALT1P15291 398 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 NAGAP17050 411 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 FBLN1P23142 703 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 PON1P27169 355 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SOAT1P35610 550 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 TRIM23P36406 574 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDK7P50613 346 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 RPS8P62241 208 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 MTHFSDQ2M296 383 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 COL28A1Q2UY09 1125 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 NKAIN1Q4KMZ8 207 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 ARHGEF16Q5VV41 709 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SPECC1LQ69YQ0 1117 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 TMEM81Q6P7N7 255 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 NDUFAF7Q7L592 441 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 KIAA1328Q86T90 577 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 VPS36Q86VN1 386 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 OR4N4Q8N0Y3 316 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 CCDC155Q8N6L0 562 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC2A12Q8TD20 617 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC25A28Q96A46 364 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 PELOQ9BRX2 385 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 MFFQ9GZY8 342 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZBTB26Q9HCK0 441 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 C20orf141Q9NUB4 165 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 XPR1Q9UBH6 696 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 MGAT4CQ9UBM8 478 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 PISDQ9UG56 409 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SERGEFQ9UGK8 458 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC24A2Q9UI40 661 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDH22Q9UJ99 828 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 PIK3C2AO00443 1686 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDC123O75794 336 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CTPS1P17812 591 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 MMP8P22894 467 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 PKLRP30613 574 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CETN2P41208 172 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 DCCP43146 1447 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 WNT3AP56704 352 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 SELENOVP59797 346 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 SHC2P98077 582 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ATP2C1P98194 919 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ECT2LQ008S8 904 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 TRAP1Q12931 704 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 NFKBIBQ15653 356 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 THOC7Q6I9Y2 204 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZC3H14Q6PJT7 736 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 GLDNQ6ZMI3 551 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 PRSS42Q7Z5A4 293 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 FAM124AQ86V42 546 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 TICAM1Q8IUC6 712 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 MCPH1Q8NEM0 835 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 TOE1Q96GM8 510 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZNF559Q9BR84 538 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 SPZ1Q9BXG8 430 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 MRPL40Q9NQ50 206 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDK12Q9NYV4 1490 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ERAP1Q9NZ08 941 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CTNNAL1Q9UBT7 734 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 KCNN3Q9UGI6 736 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 SCML1Q9UN30 329 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 DRG1Q9Y295 367 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 MAP2P11137 1827 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 USP54Q70EL1 1684 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 IQSEC2Q5JU85 1478 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 C5orf52A6NGY3 159 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CES2O00748 559 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 GPR171O14626 319 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ANKRD28O15084 1053 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CTDSPLO15194 276 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 BAG4O95429 457 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 F11P03951 625 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 SPATA31D3P0C874 917 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDH2P19022 906 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 RBL1P28749 1068 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ECHS1P30084 290 aa6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 CCND3P30281 292 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC11-209ENST00000512476 ATP12AP54707 1039 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms