RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 MAPK10P53779 464 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 ERVPABLB-1P60509 514 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 DR1Q01658 176 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 TRA2AQ13595 282 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX41-214ENST00000512334 PTK6Q13882 451 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 SEMA3AQ14563 771 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 C16orf72Q14CZ0 275 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 PLCL1Q15111 1095 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 DUS1LQ6P1R4 473 aaKnown RBP15.56■□□□□ 0.08
DDX41-214ENST00000512334 JAMLQ86YT9 394 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 NAT8LQ8N9F0 302 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 JPH3Q8WXH2 748 aaPredicted RBP15.56■□□□□ 0.08
DDX41-214ENST00000512334 NAF1Q96HR8 494 aaKnown RBP15.56■□□□□ 0.08
DDX41-214ENST00000512334 SGSM3Q96HU1 749 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 RMDN2Q96LZ7 410 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 RUNDC3BQ96NL0 473 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 ASCL3Q9NQ33 180 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 MARCH4Q9P2E8 410 aaPredicted RBP15.56■□□□□ 0.08
DDX41-214ENST00000512334 PIKFYVEQ9Y2I7 2098 aa15.56■□□□□ 0.08
DDX41-214ENST00000512334 SDR42E2A6NKP2 422 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 CCDC188H7C350 402 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 IFRD1O00458 451 aaPredicted RBP15.55■□□□□ 0.08
DDX41-214ENST00000512334 HGSO14964 777 aaPredicted RBP15.55■□□□□ 0.08
DDX41-214ENST00000512334 RRP8O43159 456 aaKnown RBP15.55■□□□□ 0.08
DDX41-214ENST00000512334 ITGA2BP08514 1039 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 GSTM1P09488 218 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 ITGB6P18564 788 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 PREPP48147 710 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 TTPAP49638 278 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 PCBP4P57723 403 aaKnown RBP15.55■□□□□ 0.08
DDX41-214ENST00000512334 GSTM4Q03013 218 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 BRD3Q15059 726 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 SYTL3Q4VX76 610 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 IGF2-ASQ6U949 168 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 XKR5Q6UX68 686 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 LRRC69Q6ZNQ3 347 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 PLXDC1Q8IUK5 500 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 SNIP1Q8TAD8 396 aaKnown RBP15.55■□□□□ 0.08
DDX41-214ENST00000512334 ELMO1Q92556 727 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 SLCO2A1Q92959 643 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 RNF14Q9UBS8 474 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
DDX41-214ENST00000512334 GOLGA8KD6RF30 607 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 GOLGA8TH3BQL2 631 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 DNALI1O14645 258 aaPredicted RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 LIN7AO14910 233 aaPredicted RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 NDUFS3O75489 264 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 PDHA2P29803 388 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 ETV5P41161 510 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 MLLT3P42568 568 aaPredicted RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 PTGIRP43119 386 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 GFERP55789 205 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 ETF1P62495 437 aaKnown RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 BOP1Q14137 746 aaKnown RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 DHX34Q14147 1143 aaKnown RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 RNASEH2BQ5TBB1 312 aaKnown RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 IZUMO3Q5VZ72 239 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 CAPRIN2Q6IMN6 1127 aaKnown RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 NAPRTQ6XQN6 538 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 SYT10Q6XYQ8 523 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 PCGF5Q86SE9 256 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 FAM129CQ86XR2 697 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 AGBL5Q8NDL9 886 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 RSC1A1Q92681 617 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 ZNF669Q96BR6 464 aaPredicted RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 TGM7Q96PF1 710 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 FERD3LQ96RJ6 166 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 TRIM56Q9BRZ2 755 aaKnown RBP15.54■□□□□ 0.08
DDX41-214ENST00000512334 TSSK1BQ9BXA7 367 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 OR52A5Q9H2C5 316 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 OGFRQ9NZT2 677 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 HEBP2Q9Y5Z4 205 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 COLEC10Q9Y6Z7 277 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 APC2O95996 2303 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 ACACAQ13085 2346 aa15.54■□□□□ 0.08
DDX41-214ENST00000512334 UBA6A0AVT1 1052 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 MAGEB16A2A368 324 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 EFCAB7A8K855 629 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 CDRT15L2A8MXV6 281 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 PRMT5O14744 637 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 CAPN5O15484 640 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 CCL4P13236 92 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 ARNTP27540 789 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 NDUFS1P28331 727 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 EIF2S3P41091 472 aaKnown RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 CAPZBP47756 277 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 RPA4Q13156 261 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 ANKRD20A4Q4UJ75 823 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 ZNF658BQ4V348 819 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 ARMC3Q5W041 872 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 PTRHD1Q6GMV3 140 aaKnown RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 KIAA0930Q6ICG6 404 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 MRNIPQ6NTE8 343 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 IRGCQ6NXR0 463 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 KLHL35Q6PF15 583 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 SDCCAG8Q86SQ7 713 aaPredicted RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 ZNF248Q8NDW4 579 aa15.53■□□□□ 0.08
DDX41-214ENST00000512334 HNRNPLLQ8WVV9 542 aaKnown RBP15.53■□□□□ 0.08
DDX41-214ENST00000512334 USP7Q93009 1102 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms