RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 GSTO2Q9H4Y5 243 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPF2Q9H7B2 306 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R3EQ9H7J1 279 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MANSC1Q9H8J5 431 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAN2C1Q9NTJ4 1040 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TOR4AQ9NXH8 423 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSPBP1Q9NZL4 362 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRPM5Q9NZQ8 1165 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHL14Q9P2G3 628 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBK1Q9UHD2 729 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC25A13Q9UJS0 675 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACAD8Q9UKU7 415 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KIAA1257Q9ULG3 409 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DTX4Q9Y2E6 619 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHA10Q9Y5I2 948 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNMB2Q9Y691 235 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MED13LQ71F56 2210 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYO9BQ13459 2157 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR91A4D1P6 747 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYNDIG1LA6NDD5 238 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 METTL21EPA6NDL7 271 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CENPXA8MT69 81 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRR32B1ATL7 298 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 WRBO00258 174 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FPGTO14772 594 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BNIP3LO60238 219 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NUAK1O60285 661 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHL41O60662 606 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DPM1O60762 260 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLASP2O75122 1294 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF682O95780 498 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYB5AP00167 134 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPING1P05155 500 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CALB1P05937 261 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZDHHC11BP0C7U3 371 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTF3P20290 206 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF10P21506 573 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MATN1P21941 496 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAJB2P25686 324 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOX5P35711 763 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TALDO1P37837 337 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTDP43251 543 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GRIA4P48058 902 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAPKAPK2P49137 400 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDK8P49336 464 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 EIF2B2P49770 351 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 STAT2P52630 851 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PSMD4P55036 377 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMBIM6P55061 237 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SRP54P61011 504 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 LSM11P83369 360 aaKnown RBP eCLIP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RGS1Q08116 209 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAPQ12884 760 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDH18Q13634 790 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF846Q147U1 533 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLCA4Q14CN2 919 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MORF4L2Q15014 288 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CRY1Q16526 586 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 EIF2S3LQ2VIR3 472 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAL1Q4LDG9 190 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC39A12Q504Y0 691 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BSPRYQ5W0U4 402 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC2A7Q6PXP3 512 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ISLR2Q6UXK2 745 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DEF8Q6ZN54 512 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 Q6ZSR9 355 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR180Q86V85 440 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZC3HC1Q86WB0 502 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 OSTM1Q86WC4 334 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC13A5Q86YT5 568 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM126BQ8IUX1 230 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRR22Q8IZ63 422 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NME8Q8N427 588 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF561Q8N587 486 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RTL3Q8N8U3 475 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF557Q8N988 423 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCAIQ8N9R8 606 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC4A11Q8NBS3 891 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 UXS1Q8NBZ7 420 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC197Q8NCU1 140 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 C19orf18Q8NEA5 215 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 POC1BQ8TC44 478 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TAS1R2Q8TE23 839 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 EZH1Q92800 747 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZBTB10Q96DT7 871 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MARK4Q96L34 752 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 AK8Q96MA6 479 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MS4A8Q9BY19 250 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM15Q9C019 465 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRCC1Q9NPI7 259 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPANQ9NQ55 473 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RGS18Q9NS28 235 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF358Q9NW07 568 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPARGC1AQ9UBK2 798 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARPP21Q9UBL0 812 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 UPB1Q9UBR1 384 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 STK17AQ9UEE5 414 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GLS2Q9UI32 602 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TUBD1Q9UJT1 453 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms