RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 CAPRIN2Q6IMN6 1127 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 UNQ6494/PRO21346Q6UXR6 183 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 TMEM26Q6ZUK4 368 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 LRRC6Q86X45 466 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF761Q86XN6 746 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 CILP2Q8IUL8 1156 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 AGGF1Q8N302 714 aaeCLIP7□□□□□ -1.29
PDLIM5-215ENST00000511586 LILRA3Q8N6C8 439 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 SERBP1Q8NC51 408 aaKnown RBP eCLIP7□□□□□ -1.29
PDLIM5-215ENST00000511586 GABPB2Q8TAK5 448 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 CALML6Q8TD86 181 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ZFPM2Q8WW38 1151 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ANKRD7Q92527 254 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ELMO1Q92556 727 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 GATA6Q92908 595 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 LRRC39Q96DD0 335 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 C12orf66Q96MD2 445 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 PANX3Q96QZ0 392 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 TRIM56Q9BRZ2 755 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 STRADBQ9C0K7 418 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 NRSN2Q9GZP1 204 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 RAB17Q9H0T7 212 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 EPB41L1Q9H4G0 881 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 COG4Q9H9E3 785 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 RDH14Q9HBH5 336 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 EPB41L5Q9HCM4 733 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 C20orf96Q9NUD7 363 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 IMP3Q9NV31 184 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 INTS10Q9NVR2 710 aaKnown RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 WHRNQ9P202 907 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 GNPTGQ9UJJ9 305 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ATXN7L1Q9ULK2 861 aaPredicted RBP7□□□□□ -1.29
PDLIM5-215ENST00000511586 VPS9D1Q9Y2B5 631 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 ENTPD2Q9Y5L3 495 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 HEBP2Q9Y5Z4 205 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 FAM169AQ9Y6X4 670 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 COLEC10Q9Y6Z7 277 aa7□□□□□ -1.29
PDLIM5-215ENST00000511586 MYLKQ15746 1914 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 PLXNB3Q9ULL4 1909 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 NCOR2Q9Y618 2525 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ARHGEF17Q96PE2 2063 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ASXL3Q9C0F0 2248 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 UBA6A0AVT1 1052 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TMEM8BA6NDV4 472 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 IQCF5A8MTL0 148 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 C1QTNF9BB2RNN3 333 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 H3BMM5 538 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 KPNA5O15131 536 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TP73O15350 636 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 DUX1O43812 170 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 BANF1O75531 89 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 UBXN7O94888 489 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ESR1P03372 595 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 RHOXF2BP0C7M4 288 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 C1QTNF9P0C862 333 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 AMD1P17707 334 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 RPS3P23396 243 aaKnown RBP eCLIP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 NDUFS1P28331 727 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 PDHA2P29803 388 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 CCKBRP32239 447 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 CCR7P32248 378 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ELK3P41970 407 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 MAPK9P45984 424 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 PREPP48147 710 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 CD151P48509 253 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 LIMK2P53671 638 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ADARP55265 1226 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ZFP36L1Q07352 338 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TRA2AQ13595 282 aaKnown RBP eCLIP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 GPR18Q14330 331 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 CRYMQ14894 314 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 RTP5Q14D33 572 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 BRD3Q15059 726 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 SYTL3Q4VX76 610 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 SPANXN3Q5MJ09 141 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 PHF19Q5T6S3 580 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 NKAIN2Q5VXU1 208 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF470Q6ECI4 717 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TMEM71Q6P5X7 295 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 WDR74Q6RFH5 385 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 XKR5Q6UX68 686 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TMPRSS9Q7Z410 1059 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 MTERF4Q7Z6M4 381 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 B3GNT8Q7Z7M8 397 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 PLXDC1Q8IUK5 500 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 LMNTD2Q8IXW0 634 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 SPDYE1Q8NFV5 336 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 OR4D9Q8NGE8 314 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 NCSTNQ92542 709 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 LPGAT1Q92604 370 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TFGQ92734 400 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 TMEM159Q96B96 161 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 NXPE2Q96DL1 559 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 ATXN7L3BQ96GX2 97 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 LIN37Q96GY3 246 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 PWWP2AQ96N64 755 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 INSM2Q96T92 566 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 RHOXF2Q9BQY4 288 aa6.99□□□□□ -1.29
PDLIM5-215ENST00000511586 NUDT22Q9BRQ3 303 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms