RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-209	ENST00000511009	RAB40AL	P0C0E4	278 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	OR2T7	P0C7T2	308 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	DANCR	P0C864	163 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	PSG1	P11464	419 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	HOXB2	P14652	356 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CDC25C	P30307	473 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	ATP6V1E1	P36543	226 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CRKL	P46109	303 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	LIMK1	P53667	647 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	UBXN1	Q04323	297 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CRYZ	Q08257	329 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	DHX34	Q14147	1143 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	OASL	Q15646	514 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	TDRD12	Q587J7	1177 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	ZRANB3	Q5FWF4	1079 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	XKR9	Q5GH70	373 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	C6orf136	Q5SQH8	315 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	FAM69B	Q5VUD6	431 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	FAM91A1	Q658Y4	838 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	FAM122C	Q6P4D5	195 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	MEPCE	Q7L2J0	689 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	ABI3BP	Q7Z7G0	1075 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	GLCCI1	Q86VQ1	547 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	ZNF34	Q8IZ26	560 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CARNMT1	Q8N4J0	409 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	C10orf53	Q8N6V4	93 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	OR5R1	Q8NH85	324 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	BBS10	Q8TAM1	723 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	MGARP	Q8TDB4	240 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	SLC38A5	Q8WUX1	472 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CORO2A	Q92828	525 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	PIGT	Q969N2	578 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	STAMBPL1	Q96FJ0	436 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	C3orf30	Q96M34	536 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	ZNF582	Q96NG8	517 aa	Predicted RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CAMK1G	Q96NX5	476 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	SLX1A	Q9BQ83	275 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	MLPH	Q9BV36	600 aa	Predicted RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	KATNB1	Q9BVA0	655 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	GTPBP2	Q9BX10	602 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	FUT8	Q9BYC5	575 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	SPRY4	Q9C004	299 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	LRMDA	Q9H2I8	198 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	FZD8	Q9H461	694 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	EBF3	Q9H4W6	596 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	DBNDD1	Q9H9R9	158 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	TBC1D7	Q9P0N9	293 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	RHCG	Q9UBD6	479 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	POLL	Q9UGP5	575 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	PADI2	Q9Y2J8	665 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	RPGRIP1L	Q68CZ1	1315 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009		A0A0U1RQJ8	604 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	PRSS51	A0A1B0GVH4	220 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009		A4D1N5	150 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TMEM178B	H3BS89	294 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	DNM1L	O00429	736 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	IFIT3	O14879	490 aa	Known RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	FMO6P	O60774	539 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SIX3	O95343	332 aa	Predicted RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	BMP10	O95393	424 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ZFY	P08048	801 aa	Predicted RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	IGHV4-30-4	P0DP06	118 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	POLR2C	P19387	275 aa	Predicted RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	PSMA3	P25788	255 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	CDC25A	P30304	524 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	CORO1A	P31146	461 aa	Known RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	GNL1	P36915	607 aa	Predicted RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	HNF4A	P41235	474 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TMPO	P42166	694 aa	Known RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	PSMC4	P43686	418 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ABCG1	P45844	678 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ASCL1	P50553	236 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TUBB4B	P68371	445 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ABAT	P80404	500 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TRAF2	Q12933	501 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	KLF9	Q13886	244 aa	Predicted RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	RRS1	Q15050	365 aa	Known RBP	4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ETFDH	Q16134	617 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	CALCRL	Q16602	461 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SMU1	Q2TAY7	513 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TMEM35A	Q53FP2	167 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SHE	Q5VZ18	495 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SYCE2	Q6PIF2	218 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TMPRSS11F	Q6ZWK6	438 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ATG9A	Q7Z3C6	839 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TUSC5	Q8IXB3	177 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	TIGD4	Q8IY51	512 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SYCP3	Q8IZU3	236 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ARL10	Q8N8L6	244 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	NRAC	Q8N912	160 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SPC24	Q8NBT2	197 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	ATAD1	Q8NBU5	361 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	OR52I2	Q8NH67	350 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	MOSPD2	Q8NHP6	518 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	SEMA4D	Q92854	862 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	EXOC4	Q96A65	974 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	MOB3A	Q96BX8	217 aa		4.53	□□□□□ -1.68
MBD4-209	ENST00000511009	OTUB1	Q96FW1	271 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms