RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PRAMEF33A0A0G2JMD5 474 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 IGHV5-10-1A0A0J9YXX1 117 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 A8MU76 341 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CDRT15L2A8MXV6 281 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 HGSO14964 777 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CHUKO15111 745 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PIAS1O75925 651 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 TUBB4AP04350 444 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 MYBL2P10244 700 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 MLNP12872 115 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 HOXB3P14651 431 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 AMD1P17707 334 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 ITIH1P19827 911 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 RPL10P27635 214 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PBLDP30039 288 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 ELK3P41970 407 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 HALP42357 657 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 FASLGP48023 281 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PGGT1BP53609 377 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 LIMK2P53671 638 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 DRG2P55039 364 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PDE1BQ01064 536 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CKAP4Q07065 602 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 TRA2AQ13595 282 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 NR1D2Q14995 579 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 MORF4L2Q15014 288 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 ANKRD20A4Q4UJ75 823 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PCID2Q5JVF3 399 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 ARHGAP40Q5TG30 622 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 TMEM71Q6P5X7 295 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 TMEM220Q6QAJ8 160 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 DET1Q7L5Y6 550 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 GPR155Q7Z3F1 870 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 TMPRSS9Q7Z410 1059 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 AMZ2Q86W34 360 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM129CQ86XR2 697 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 GSPT2Q8IYD1 628 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 AGBL5Q8NDL9 886 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 OR4D9Q8NGE8 314 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 USP7Q93009 1102 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CXorf40BQ96DE9 158 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 DCUN1D1Q96GG9 259 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 NRTNQ99748 197 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 TIMM29Q9BSF4 260 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 IL22Q9GZX6 179 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 ASB8Q9H765 288 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 MRM3Q9HC36 420 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CPNE5Q9HCH3 593 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 RRAGDQ9NQL2 400 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 KLHL3Q9UH77 587 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CRLS1Q9UJA2 301 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 RIMKLBQ9ULI2 386 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 CHMP2BQ9UQN3 213 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 MED16Q9Y2X0 877 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 PCDHGA7Q9Y5G6 932 aa8.58□□□□□ -1.04
PDLIM5-213ENST00000509357 HEATR9A2RTY3 570 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 A6NCN8 305 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 OR2AG2A6NM03 316 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 PRAMEF10O60809 474 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 POP7O75817 140 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 RALBP11234 206 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CCL4P13236 92 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 ITGALP20701 1170 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 ACRV1P26436 265 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 GABRB3P28472 473 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 HADHAP40939 763 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 NPY2RP49146 381 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CARSP49589 748 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CLCNKAP51800 687 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 GPX6P59796 221 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 TIAL1Q01085 375 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 GUCY2DQ02846 1103 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CRYMQ14894 314 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 C16orf72Q14CZ0 275 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 BBS9Q3SYG4 887 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 STEAP4Q687X5 459 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 C8orf74Q6P047 294 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 NAPRTQ6XQN6 538 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 UNC5AQ6ZN44 842 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 ZNF574Q6ZN55 896 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CCDC81Q6ZN84 652 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CENPUQ71F23 418 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 SNX20Q7Z614 316 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CLEC14AQ86T13 490 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 SERPINA9Q86WD7 417 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 ANKMY2Q8IV38 441 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 DENND6AQ8IWF6 608 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 NXPE1Q8N323 547 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 CLDN19Q8N6F1 224 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 ZNF669Q96BR6 464 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 SGF29Q96ES7 293 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 RUNDC3BQ96NL0 473 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 C19orf43Q9BQ61 176 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 TBC1D10AQ9BXI6 508 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 PRORYQ9H606 182 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 XAB2Q9HCS7 855 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC39A1Q9NY26 324 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms