RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 DERL2Q9GZP9 239 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MTIF3Q9H2K0 278 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LINC00597Q9H2U6 94 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 DDX18Q9NVP1 670 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF711Q9Y462 761 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 RNF103-CHMP3A0A140T963 221 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 H3BMM5 538 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 NR5A2O00482 541 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 STX16O14662 325 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 KERAO60938 352 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 CRCPO75575 148 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 RASAL1O95294 804 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 CA3P07451 260 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 SRCP12931 536 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC6A2P23975 617 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 PSMA3P25788 255 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 KCNK10P57789 538 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 PLOD1Q02809 727 aaPredicted RBP10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 MERTKQ12866 999 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 ATP6AP1Q15904 470 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 FKBP9P1Q75LS8 142 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 RETREG3Q86VR2 466 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 ZSWIM9Q86XI8 627 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 PROSER1Q86XN7 944 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 PHYKPLQ8IUZ5 450 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 RYBPQ8N488 228 aaPredicted RBP10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 CHCHD4Q8N4Q1 142 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 OR9I1Q8NGQ6 314 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 PNPT1Q8TCS8 783 aaKnown RBP10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 VOPP1Q96AW1 172 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 TUBGCP3Q96CW5 907 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 C3orf30Q96M34 536 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 ATOH8Q96SQ7 321 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 AARSD1Q9BTE6 412 aaKnown RBP10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 TAS2R13Q9NYV9 303 aa10.86□□□□□ -0.67
SH3RF1-203ENST00000508685 ATP6AP2A0A1C7CYW4 349 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 A8MX80 341 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PIP5K1BO14986 540 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 NDUFS3O75489 264 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 ATP6AP2O75787 350 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 MLYCDO95822 493 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PYGLP06737 847 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 GFAPP14136 432 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 HGFP14210 728 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CKMT2P17540 419 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 ATP6V1B2P21281 511 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CD9P21926 228 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 HMGCLP35914 325 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 SEMG2Q02383 582 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CLCQ05315 142 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 RAD51Q06609 339 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 BCL2L1Q07817 233 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC36A3Q495N2 470 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 SETMARQ53H47 684 aaPredicted RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 ZRANB3Q5FWF4 1079 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 FAM219BQ5XKK7 198 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 DDIASQ8IXT1 998 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 NKAPQ8N5F7 415 aaKnown RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PAF1Q8N7H5 531 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 FAM47BQ8NA70 645 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 GAB3Q8WWW8 586 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 EXT2Q93063 718 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CNDP2Q96KP4 475 aaKnown RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 BBS2Q9BXC9 721 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 GPR63Q9BZJ6 419 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CCDC68Q9H2F9 335 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 FBRSL1Q9HCM7 1045 aaKnown RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 IL17CQ9P0M4 197 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 GALPQ9UBC7 116 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 LEF1Q9UJU2 399 aaPredicted RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 AURKCQ9UQB9 309 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PCDHA9Q9Y5H5 950 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 C1orf232A0A0U1RR37 186 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 C5orf67F2Z3F1 127 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 IFRD1O00458 451 aaPredicted RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 SOCS2O14508 198 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 EEDO75530 441 aaKnown RBP10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PRR35P0CG20 571 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 UROSP10746 265 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 MTHFD2P13995 350 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 TYRP14679 529 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CEBPBP17676 345 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PFKLP17858 780 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CCT8P50990 548 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PTPRNQ16849 979 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PFKFB4Q16877 469 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 VPS26BQ4G0F5 336 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 ARHGAP15Q53QZ3 475 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PRSS36Q5K4E3 855 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PAQR3Q6TCH7 311 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 ABRAXAS1Q6UWZ7 409 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 FBXO39Q8N4B4 442 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 CBR4Q8N4T8 237 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 OR2AP1Q8NGE2 309 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 OSCP1Q8WVF1 389 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC30A3Q99726 388 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms