RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 LOC100509620A0A075B734 347 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 PMS2P5A8MQ11 134 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 AVILO75366 819 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 CDKN1AP38936 164 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 KRTAP10-9P60411 292 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 IRF3Q14653 427 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 KCTD2Q14681 263 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 DLG2Q15700 870 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 NTRK2Q16620 822 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 CCDC184Q52MB2 194 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 MEX3BQ6ZN04 569 aaKnown RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 GET4Q7L5D6 327 aaPredicted RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 ATG9AQ7Z3C6 839 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 AFAP1Q8N556 730 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 PAFAH2Q99487 392 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 GFI1Q99684 422 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 MRPL15Q9P015 296 aaKnown RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 CPSF2Q9P2I0 782 aaKnown RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 SEC63Q9UGP8 760 aaKnown RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 CHORDC1Q9UHD1 332 aaPredicted RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 ZNF148Q9UQR1 794 aa4.82□□□□□ -1.64
GYPA-205ENST00000508337 SPIN1Q9Y657 262 aaPredicted RBP4.82□□□□□ -1.64
GYPA-205ENST00000508337 LNP1A1A4G5 178 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 CTAGE9A4FU28 777 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 A6NL46 340 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 DUXAA6NLW8 204 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 A8MV72 311 aaPredicted RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 PCDH7O60245 1069 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 LDLRP01130 860 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 CTAGE8P0CG41 777 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 PAX1P15863 534 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 STAT2P52630 851 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 KCNJ10P78508 379 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 SPOCK1Q08629 439 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 EPS8Q12929 822 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 PRKG2Q13237 762 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 MEA1Q16626 185 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 C15orf59Q2T9L4 293 aaPredicted RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 IGSF11Q5DX21 431 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 DHRS7BQ6IAN0 325 aaPredicted RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 CTAGE4Q8IX94 777 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 GPALPP1Q8IXQ4 340 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 ZNF248Q8NDW4 579 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 ZNF582Q96NG8 517 aaPredicted RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 SLX1AQ9BQ83 275 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 TRAF4Q9BUZ4 470 aaPredicted RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 FNDC11Q9BVV2 318 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 MOV10L1Q9BXT6 1211 aaKnown RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 MDFICQ9P1T7 246 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 SLC7A7Q9UM01 511 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 PPIEQ9UNP9 301 aaKnown RBP4.81□□□□□ -1.64
GYPA-205ENST00000508337 RUSC2Q8N2Y8 1516 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 ARHGEF40Q8TER5 1519 aa4.81□□□□□ -1.64
GYPA-205ENST00000508337 RPGRIP1LQ68CZ1 1315 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 ELOVL7A1L3X0 281 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 SMIM1B2RUZ4 78 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 BLOC1S5-TXNDC5H3BN57 136 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 SSX4O60224 188 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 PRAMEF11O60813 436 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 ZWINTO95229 277 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 PRLRP16471 622 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 MSH3P20585 1137 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 HOXD13P35453 343 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 EIF2DP41214 584 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 HSD17B4P51659 736 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 PNLIPRP2P54317 469 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 LINC01547P58512 204 aaPredicted RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 WDR38Q5JTN6 314 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 DENND5BQ6ZUT9 1274 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 MARK2Q7KZI7 788 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 FBXO39Q8N4B4 442 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 DNAJC22Q8N4W6 341 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 DAZLQ92904 295 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 TMEM143Q96AN5 459 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 NSUN4Q96CB9 384 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 RSRC1Q96IZ7 334 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 C17orf77Q96MU5 243 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 RHNO1Q9BSD3 238 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 SPATC1LQ9H0A9 340 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 LARSQ9P2J5 1176 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 PTRH2Q9Y3E5 179 aaKnown RBP4.8□□□□□ -1.64
GYPA-205ENST00000508337 GRIP1Q9Y3R0 1128 aa4.8□□□□□ -1.64
GYPA-205ENST00000508337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.8□□□□□ -1.64
GYPA-205ENST00000508337 OR6C76A6NM76 312 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 TSPAN1O60635 241 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 CDH11P55287 796 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 TAF13Q15543 124 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 ZNF876PQ49A33 203 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 RAB6CQ53S08 254 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 TECRLQ5HYJ1 363 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 RBMS3Q6XE24 437 aaKnown RBP4.79□□□□□ -1.64
GYPA-205ENST00000508337 SH2D5Q6ZV89 423 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 ISCA2Q86U28 154 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 L3MBTL4Q8NA19 623 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 KLHDC9Q8NEP7 349 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
GYPA-205ENST00000508337 FSD1Q9BTV5 496 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 RAB6CQ9H0N0 254 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 SLC52A3Q9NQ40 469 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms