RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RPIAP49247 311 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 CLCNKAP51800 687 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 ACTR1AP61163 376 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 PTPN12Q05209 780 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 CUL2Q13617 745 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 EMC2Q15006 297 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 PUM3Q15397 648 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 SH2D5Q6ZV89 423 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 SV2AQ7L0J3 742 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 SPRED1Q7Z699 444 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 ZFAND4Q86XD8 727 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 ARID3BQ8IVW6 561 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 THEM5Q8N1Q8 247 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 C9orf62Q8N4C0 152 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 ARL14Q8N4G2 192 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 UBR7Q8N806 425 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 TRPV1Q8NER1 839 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 CLHC1Q8NHS4 586 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 RP9Q8TA86 221 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 PI4K2AQ9BTU6 479 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 DNTTIP1Q9H147 329 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 METTL9Q9H1A3 318 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 MARK1Q9P0L2 795 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC17A7Q9P2U7 560 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 MGAT4BQ9UQ53 548 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 AFG3L2Q9Y4W6 797 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 DGKBQ9Y6T7 804 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 RNF215Q9Y6U7 377 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 A0A1W2PPM1 405 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ANKDD1BA6NHY2 528 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 METTL15A6NJ78 407 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SULT1C2O00338 296 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 AVILO75366 819 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RFPL3O75679 317 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 OAZ2O95190 189 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MED26O95402 600 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PEX11BO96011 259 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 KLK3P07288 261 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PLS3P13797 630 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 CD1EP15812 388 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 XRCC1P18887 633 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ITGB8P26012 769 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ATXN1P54253 815 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PSPHP78330 225 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MAT1AQ00266 395 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 GTF2BQ00403 316 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 DEFA6Q01524 100 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 DSC2Q02487 901 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FOXO1Q12778 655 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FSTL1Q12841 308 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 NFIXQ14938 502 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 LRRC26Q2I0M4 334 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF528Q3MIS6 628 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 KLHL26Q53HC5 615 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 IL31Q6EBC2 164 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 CNNM4Q6P4Q7 775 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 BLOC1S3Q6QNY0 202 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 LRRC55Q6ZSA7 311 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 DENND5BQ6ZUT9 1274 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RASAL3Q86YV0 1011 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 EXOSC8Q96B26 276 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 NAT9Q9BTE0 207 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PDCD10Q9BUL8 212 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FAM126AQ9BYI3 521 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 OR51V1Q9H2C8 321 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FAM83DQ9H4H8 585 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 OPA3Q9H6K4 179 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SPACA1Q9HBV2 294 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MYOZ1Q9NP98 299 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 XPNPEP1Q9NQW7 623 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 IMPAD1Q9NX62 359 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MIOXQ9UGB7 285 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RAPGEFL1Q9UHV5 662 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MGAT4AQ9UM21 535 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RUVBL2Q9Y230 463 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC22A23A1A5C7 686 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FAM83GA6ND36 823 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 E5RI56 91 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 TO15178 435 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 LPXNO60711 386 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SOCS5O75159 536 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PRKRAO75569 313 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 EIF3GO75821 320 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RAF1P04049 648 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 GNAO1P09471 354 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 JUNDP17535 347 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 DDX6P26196 483 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SPRP35270 261 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 CCT3P49368 545 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 KCNK10P57789 538 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 HSF2Q03933 536 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 BST1Q10588 318 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FGL2Q14314 439 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PDZK1Q5T2W1 519 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms