RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SCHIP1Q9P0W5 487 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-210ENST00000506767 KLHL42Q9P2K6 505 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 GALPQ9UBC7 116 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 CDYLQ9Y232 598 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 WDR37Q9Y2I8 494 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 WDR87Q6ZQQ6 2873 aa12.59□□□□□ -0.39
TCOF1-210ENST00000506767 ARHGEF17Q96PE2 2063 aaPredicted RBP12.58□□□□□ -0.39
TCOF1-210ENST00000506767 A0A087WUV0 522 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 MED19A0JLT2 244 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 OR5K4A6NMS3 321 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 B4DGG1 531 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 KPNA5O15131 536 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 SNX2O60749 519 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 SLCO2B1O94956 709 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 LDOC1O95751 146 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CKMT1AP12532 417 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 SLC2A4P14672 509 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 ITGB6P18564 788 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 XRCC1P18887 633 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CSRP1P21291 193 aaKnown RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 SDHBP21912 280 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 RPL10P27635 214 aaKnown RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 PDHA2P29803 388 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 GP5P40197 560 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 ABCG1P45844 678 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 GBX1Q14549 363 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CLCA4Q14CN2 919 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 EFTUD2Q15029 972 aaKnown RBP eCLIP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 C14orf28Q4W4Y0 310 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 RBM20Q5T481 1227 aaKnown RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 GRTP1Q5TC63 336 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CAPRIN2Q6IMN6 1127 aaKnown RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 EMBQ6PCB8 327 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 GLRX5Q86SX6 157 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CTAGE3PQ8IX95 158 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 PPM1NQ8N819 430 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 KYQ8NBH2 561 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 PATE1Q8WXA2 126 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 GLMNQ92990 594 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CNDP2Q96KP4 475 aaKnown RBP12.58□□□□□ -0.4
TCOF1-210ENST00000506767 RBBP8Q99708 897 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CDC6Q99741 560 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 OR52A5Q9H2C5 316 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 CCDC68Q9H2F9 335 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 RHOJQ9H4E5 214 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 DHRS7Q9Y394 339 aa12.58□□□□□ -0.4
TCOF1-210ENST00000506767 KIR2DS5A0A0G2JLQ3 304 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 A0A0G2JNG1 304 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 EME2A4GXA9 379 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 PDZK1P1A8MUH7 402 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 KIR2DS3K7RE56 304 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 APOA4P06727 396 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 CKMT2P17540 419 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 CHRM3P20309 590 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 SLC19A1P41440 591 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 FASLGP48023 281 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 PREPP48147 710 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 CDKN2DP55273 166 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 BOP1Q14137 746 aaKnown RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 SLC29A2Q14542 456 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 KIR2DS5Q14953 304 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 SEPT7Q16181 437 aaKnown RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 UAP1Q16222 522 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 PLEKHS1Q5SXH7 462 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 HECTD2Q5U5R9 776 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 FAM45BPQ6NSW5 357 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 OTOAQ7RTW8 1153 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 VRK3Q8IV63 474 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 SLC22A15Q8IZD6 547 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 ACVR1CQ8NER5 493 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 GIMAP7Q8NHV1 300 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 FAM45AQ8TCE6 357 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 ASZ1Q8WWH4 475 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 TMEM159Q96B96 161 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 VPS39Q96JC1 886 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 RMDN2Q96LZ7 410 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 INSM2Q96T92 566 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 NDNQ99608 321 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 SLC30A3Q99726 388 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 WWP1Q9H0M0 922 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 DLL3Q9NYJ7 618 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 SIRPGQ9P1W8 387 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 ZNF624Q9P2J8 865 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 FAM8A1Q9UBU6 413 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 FTSJ1Q9UET6 329 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
TCOF1-210ENST00000506767 PADI4Q9UM07 663 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 PSMD13Q9UNM6 376 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 VWA7Q9Y334 891 aa12.57□□□□□ -0.4
TCOF1-210ENST00000506767 CEP250Q9BV73 2442 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 TRBV23OR9-2A0A075B6M9 112 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 FAM95CA0A1B0GW59 222 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 E5RI56 91 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 TNFSF14O43557 240 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms