RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TMEM135Q86UB9 458 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 OR10G6Q8NH81 332 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 WDR36Q8NI36 951 aaKnown RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 NCSTNQ92542 709 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 CCDC74BQ96LY2 380 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 PWWP2AQ96N64 755 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 KRT12Q99456 494 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 NRTNQ99748 197 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 STN1Q9H668 368 aaKnown RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 IMP3Q9NV31 184 aaKnown RBP17.44■□□□□ 0.38
SMN1-204ENST00000506163 PCDHGA8Q9Y5G5 932 aa17.44■□□□□ 0.38
SMN1-204ENST00000506163 DXOO77932 396 aaKnown RBP17.43■□□□□ 0.38
SMN1-204ENST00000506163 F7P08709 466 aaPredicted RBP17.43■□□□□ 0.38
SMN1-204ENST00000506163 ETV5P41161 510 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 HALP42357 657 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 KIAA0930Q6ICG6 404 aaPredicted RBP17.43■□□□□ 0.38
SMN1-204ENST00000506163 CASC4Q6P4E1 433 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 FOXR1Q6PIV2 292 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 WDR74Q6RFH5 385 aaPredicted RBP17.43■□□□□ 0.38
SMN1-204ENST00000506163 IGDCC3Q8IVU1 814 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 AVL9Q8NBF6 648 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 SPATA4Q8NEY3 305 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMN1-204ENST00000506163 AHCYL2Q96HN2 611 aaKnown RBP17.43■□□□□ 0.38
SMN1-204ENST00000506163 C12orf66Q96MD2 445 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 P2RY12Q9H244 342 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 CACNA1BQ00975 2339 aa17.43■□□□□ 0.38
SMN1-204ENST00000506163 TMX2-CTNND1H3BSU7 103 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 PLD2O14939 933 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 ZW10O43264 779 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 DUX1O43812 170 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 THRAP10827 490 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 CCL4P13236 92 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 ITGB6P18564 788 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 ITIH1P19827 911 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 GFERP55789 205 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 BRD3Q15059 726 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 TBC1D25Q3MII6 688 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 IGF2-ASQ6U949 168 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 SYDE1Q6ZW31 735 aaPredicted RBP17.42■□□□□ 0.38
SMN1-204ENST00000506163 UNC5BQ8IZJ1 945 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 FBXO39Q8N4B4 442 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 PHC3Q8NDX5 983 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 RSC1A1Q92681 617 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 ZNF669Q96BR6 464 aaPredicted RBP17.42■□□□□ 0.38
SMN1-204ENST00000506163 C16orf45Q96MC5 204 aaPredicted RBP17.42■□□□□ 0.38
SMN1-204ENST00000506163 WDR83Q9BRX9 315 aaKnown RBP17.42■□□□□ 0.38
SMN1-204ENST00000506163 STRADBQ9C0K7 418 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 PLAC1Q9HBJ0 212 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 LOXL2Q9Y4K0 774 aa17.42■□□□□ 0.38
SMN1-204ENST00000506163 PKD1L2Q7Z442 2459 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 SLC5A10A0PJK1 596 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 MAGEB16A2A368 324 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 A8MU76 341 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 CDRT15L2A8MXV6 281 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 BHMG1C9JSJ3 638 aaPredicted RBP17.41■□□□□ 0.38
SMN1-204ENST00000506163 UBXN7O94888 489 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 TNFSF15O95150 251 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 CCR7P32248 378 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 PPP1CAP62136 330 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 DHX9Q08211 1270 aaKnown RBP17.41■□□□□ 0.38
SMN1-204ENST00000506163 C2orf54Q08AI8 447 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 DHX34Q14147 1143 aaKnown RBP17.41■□□□□ 0.38
SMN1-204ENST00000506163 ZNF789Q5FWF6 425 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 ARMC3Q5W041 872 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
SMN1-204ENST00000506163 ARHGAP22Q7Z5H3 698 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 HOOK3Q86VS8 718 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 SPNS2Q8IVW8 549 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 KRT222Q8N1A0 295 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 ELMO1Q92556 727 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 RUNDC3BQ96NL0 473 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 BIRC8Q96P09 236 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 TRIM31Q9BZY9 425 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 SAMD15Q9P1V8 674 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 ANAPC5Q9UJX4 755 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 RPS6KL1Q9Y6S9 549 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 DSPP15924 2871 aaKnown RBP17.41■□□□□ 0.38
SMN1-204ENST00000506163 AHCTF1Q8WYP5 2266 aa17.41■□□□□ 0.38
SMN1-204ENST00000506163 PRMT5O14744 637 aaPredicted RBP17.4■□□□□ 0.38
SMN1-204ENST00000506163 SLC35G4P0C7Q5 338 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 OR56A5P0C7T3 313 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 ACADLP28330 430 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 LEPRP48357 1165 aaKnown RBP17.4■□□□□ 0.38
SMN1-204ENST00000506163 TTPAP49638 278 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 TYSND1Q2T9J0 566 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 AARS2Q5JTZ9 985 aaKnown RBP17.4■□□□□ 0.38
SMN1-204ENST00000506163 CTSL3PQ5NE16 218 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 SNAP47Q5SQN1 464 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 CENPUQ71F23 418 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 VRK3Q8IV63 474 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 RBM12BQ8IXT5 1001 aaKnown RBP17.4■□□□□ 0.38
SMN1-204ENST00000506163 FGF11Q92914 225 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 TTC1Q99614 292 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 DPYSL5Q9BPU6 564 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 VPS37BQ9H9H4 285 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 KLHL3Q9UH77 587 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms