RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 DHPSP49366 369 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 AFF3P51826 1226 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 HK3P52790 923 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 PGGT1BP53609 377 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SLC18A1P54219 525 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SRP54P61011 504 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 MAGOHP61326 146 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 DLG1Q12959 904 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 EIF2B5Q13144 721 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 RPA4Q13156 261 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SIM2Q14190 667 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 FZD2Q14332 565 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ALG11Q2TAA5 492 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TTLL9Q3SXZ7 439 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TAF1BQ53T94 588 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 PPM1JQ5JR12 505 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 METRNLQ641Q3 311 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 KCTD16Q68DU8 428 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 LRRC8EQ6NSJ5 796 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 DOK6Q6PKX4 331 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 PAQR3Q6TCH7 311 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 CYHR1Q6ZMK1 362 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 CEP68Q76N32 757 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 OTOAQ7RTW8 1153 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 RABEPKQ7Z6M1 372 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 PIM3Q86V86 326 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 AMZ2Q86W34 360 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SPATS2Q86XZ4 545 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 TRAPPC5Q8IUR0 188 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SYT12Q8IV01 421 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 RASGRP3Q8IV61 690 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SRRM1Q8IYB3 904 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 CENPLQ8N0S6 344 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 NKAPQ8N5F7 415 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 ZBTB2Q8N680 514 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 BEND7Q8N7W2 519 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 SIDT2Q8NBJ9 832 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 HM13Q8TCT9 377 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 NAT14Q8WUY8 206 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 EEF1AKMT1Q8WVE0 214 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ANKRD49Q8WVL7 239 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ASZ1Q8WWH4 475 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 OR1E3Q8WZA6 343 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 GLMNQ92990 594 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SKA1Q96BD8 255 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 GPR78Q96P69 363 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SMC6Q96SB8 1091 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 DERL2Q9GZP9 239 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 CENPHQ9H3R5 247 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ERVMER34-1Q9H9K5 563 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 GPAMQ9HCL2 828 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 MRPL40Q9NQ50 206 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 TMEM74BQ9NUR3 256 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TRNAU1APQ9NX07 287 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 KLQ9UEF7 1012 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SLC23A2Q9UGH3 650 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 SUSD2Q9UGT4 822 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 DCDC2Q9UHG0 476 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ZNHIT2Q9UHR6 403 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TRMT6Q9UJA5 497 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 TLK1Q9UKI8 766 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 GRID1Q9ULK0 1009 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ADAMTS20P59510 1910 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 H3BQF6 201 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 COPEO14579 308 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 GLRA3O75311 464 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 EPN2O95208 641 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 RASGRP1O95267 797 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 MATN4O95460 622 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 CSF2P04141 144 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 APOA4P06727 396 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 LTA4HP09960 611 aaKnown RBP7.06□□□□□ -1.28
NUP54-204ENST00000506098 CCDC166P0CW27 439 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 BRAFP15056 766 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 NME1P15531 152 aaKnown RBP7.06□□□□□ -1.28
NUP54-204ENST00000506098 CD1DP15813 335 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 SAT1P21673 171 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 CTSKP43235 329 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 CCT5P48643 541 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 CSNK1EP49674 416 aaKnown RBP7.06□□□□□ -1.28
NUP54-204ENST00000506098 RGS4P49798 205 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 BLKP51451 505 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 NXPH1P58417 271 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 IL2P60568 153 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 ATP6V0D1P61421 351 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 IRF9Q00978 393 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 PPARDQ03181 441 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 LRP8Q14114 963 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 ZNF460Q14592 562 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 ACAP2Q15057 778 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 TEAD4Q15561 434 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 DUOXA1Q1HG43 343 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 FAM83EQ2M2I3 478 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 TSNAXIP1Q2TAA8 658 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 ACSBG2Q5FVE4 666 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 AGAP9Q5VTM2 703 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 SLC23A3Q6PIS1 610 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 ZC3H14Q6PJT7 736 aaKnown RBP7.06□□□□□ -1.28
NUP54-204ENST00000506098 WASH2PQ6VEQ5 465 aa7.06□□□□□ -1.28
NUP54-204ENST00000506098 RAPH1Q70E73 1250 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms